RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 UBE2HP62256 183 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 PDE4CQ08493 712 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 MESP2Q0VG99 397 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 BST2Q10589 180 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 EFEMP1Q12805 493 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 PAK1Q13153 545 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ELF2Q15723 593 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CAMK4Q16566 473 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 HSF5Q4G112 596 aaPredicted RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 RAB41Q5JT25 222 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 EOGTQ5NDL2 527 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 C10orf76Q5T2E6 689 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ANO7Q6IWH7 933 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 FOXR2Q6PJQ5 311 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 KBTBD6Q86V97 674 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CREBRFQ8IUR6 639 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 SFTPA1Q8IWL2 248 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 SIX6OS1Q8N1H7 587 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ALLCQ8N6M5 410 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 TRIML1Q8N9V2 468 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 IL17RCQ8NAC3 791 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 UBA3Q8TBC4 463 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ZC3H10Q96K80 434 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 IPO9Q96P70 1041 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 DCLK3Q9C098 648 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 ARRDC1-AS1Q9H2J1 176 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 POLMQ9NP87 494 aaPredicted RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 DNAJC17Q9NVM6 304 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 DLL3Q9NYJ7 618 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 MARCH2Q9P0N8 246 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 KIAA1468Q9P260 1216 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 RASAL2Q9UJF2 1139 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 STRIP2Q9ULQ0 834 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.29e-6■□□□□ 8.4
SNRPD3-205ENST00000468770 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 CEP250Q9BV73 2442 aa7.54□□□□□ -1.2
SNRPD3-205ENST00000468770 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 SLC12A8A0AV02 714 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 SGK1O00141 431 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TULP2O00295 520 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 O00370 1275 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 DCLK1O15075 740 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TRIM24O15164 1050 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 STC2O76061 302 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 HMBSP08397 361 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 SETSIPP0DME0 302 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 CORO1AP31146 461 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 KIR2DL1P43626 348 aaPredicted RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 ATXN1P54253 815 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 STILQ15468 1287 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 CNGA2Q16280 664 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PLK5Q496M5 336 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PM20D1Q6GTS8 502 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 SDE2Q6IQ49 451 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 LCLAT1Q6UWP7 414 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TMEM92Q6UXU6 159 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 Q6ZNB5 142 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PRR23CQ6ZRP0 262 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TRMT11Q7Z4G4 463 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 C11orf74Q86VG3 221 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TRIM59Q8IWR1 403 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 ZNF513Q8N8E2 541 aaPredicted RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TERB1Q8NA31 727 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 C12orf50Q8NA57 414 aaPredicted RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 LMO3Q8TAP4 145 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 RNF139Q8WU17 664 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 NDRG1Q92597 394 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 BHMTQ93088 406 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 CNOT6LQ96LI5 555 aaKnown RBP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 TPSD1Q9BZJ3 242 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 ULBP1Q9BZM6 244 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 ZDHHC4Q9NPG8 344 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PLK2Q9NYY3 685 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 MARK1Q9P0L2 795 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 BCCIPQ9P287 314 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 INVSQ9Y283 1065 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 PCDHGA5Q9Y5G8 931 aa7.53□□□□□ -1.2
SNRPD3-205ENST00000468770 FRYLO94915 3013 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 TCRBV21S2A2A0A5A6 115 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 MAP3K13O43283 966 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 CACNG3O60359 315 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 ADAM23O75077 832 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 EPN2O95208 641 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 KLKB1P03952 638 aa7.52□□□□□ -1.21
SNRPD3-205ENST00000468770 CYBBP04839 570 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms