RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SND1Q7KZF4 910 aaKnown RBP eCLIP19.75■□□□□ 0.756e-9■■■■■ 32.8
SMC4-209ENST00000468653 BNIPLQ7Z465 357 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 CCDC185Q8N715 623 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 SPPL2BQ8TCT7 592 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 RIN2Q8WYP3 895 aaPredicted RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 YME1L1Q96TA2 773 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 MTMR11A4FU01 709 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 EFEMP2O95967 443 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 LAG3P18627 525 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 GPR15P49685 360 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 YWHAGP61981 247 aaKnown RBP eCLIP19.75■□□□□ 0.751e-117■■■■■ 400.8
SMC4-209ENST00000468653 PPIGQ13427 754 aaKnown RBP eCLIP19.75■□□□□ 0.752e-27■■■■■ 81.9
SMC4-209ENST00000468653 SDHAF4Q5VUM1 108 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 DRICH1Q6PGQ1 229 aaPredicted RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 RNF19BQ6ZMZ0 732 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 GSTA5Q7RTV2 222 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 UBE2Q1Q7Z7E8 422 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 VSIG1Q86XK7 387 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 NUP93Q8N1F7 819 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 ADAM32Q8TC27 787 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 TMEM169Q96HH4 297 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 RNF157Q96PX1 679 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 FRMD8P1Q9BZ68 369 aaPredicted RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 FAM204AQ9H8W3 233 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 RC3H2Q9HBD1 1191 aaKnown RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 DNPEPQ9ULA0 475 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 FZD10Q9ULW2 581 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 ZNF148Q9UQR1 794 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 SNX24Q9Y343 169 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 CDY1Q9Y6F8 540 aa19.75■□□□□ 0.75
SMC4-209ENST00000468653 MRPL42Q9Y6G3 142 aaKnown RBP19.75■□□□□ 0.75
SMC4-209ENST00000468653 F9P00740 461 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 L1CAMP32004 1257 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 DRG2P55039 364 aaKnown RBP19.74■□□□□ 0.75
SMC4-209ENST00000468653 CASP8Q14790 479 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 PSMD5Q16401 504 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 DPYSL2Q16555 572 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 MGAT5BQ3V5L5 792 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 PSTKQ8IV42 348 aaKnown RBP19.74■□□□□ 0.75
SMC4-209ENST00000468653 SLC39A11Q8N1S5 342 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 TTC9BQ8N6N2 239 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 FBXO22Q8NEZ5 403 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 ACTL9Q8TC94 416 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 C2orf15Q8WU43 125 aaKnown RBP19.74■□□□□ 0.75
SMC4-209ENST00000468653 ZNF670Q9BS34 389 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 VN1R3Q9BXE9 311 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 PIGVQ9NUD9 493 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 DDIT4Q9NX09 232 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 SAE1Q9UBE0 346 aaPredicted RBP19.74■□□□□ 0.75
SMC4-209ENST00000468653 MTRRQ9UBK8 725 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 SLC27A5Q9Y2P5 690 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 COL4A6Q14031 1691 aa19.74■□□□□ 0.75
SMC4-209ENST00000468653 CARNS1A5YM72 827 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 APOC4-APOC2K7ER74 178 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 APOC2P02655 101 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 FGBP02675 491 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 VCPP55072 806 aaKnown RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 OTUD4Q01804 1114 aaKnown RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 ANKRD20A8PQ5CZ79 823 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 BTBD8Q5XKL5 378 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 ZNF365Q70YC5 407 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 BEND5Q7L4P6 421 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 RNF168Q8IYW5 571 aaPredicted RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 COLGALT1Q8NBJ5 622 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 FAM71BQ8TC56 605 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 PIK3R5Q8WYR1 880 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 CAVIN3Q969G5 261 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 PGAP3Q96FM1 320 aaPredicted RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 SEPT5Q99719 369 aaPredicted RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 FBXO44Q9H4M3 255 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.73■□□□□ 0.752e-7■■■■□ 26.2
SMC4-209ENST00000468653 SPG21Q9NZD8 308 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 ASIC3Q9UHC3 531 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 DRG1Q9Y295 367 aaKnown RBP19.73■□□□□ 0.75
SMC4-209ENST00000468653 BACE2Q9Y5Z0 518 aa19.73■□□□□ 0.75
SMC4-209ENST00000468653 ZNF487B1APH4 448 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 C2CD2LO14523 706 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 APOL1O14791 398 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SASH3O75995 380 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SOD2P04179 222 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 FAM153BP0C7A2 387 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 IL4RP24394 825 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 GBP1P32455 592 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 FPGSQ05932 587 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 NNTQ13423 1086 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 PTK6Q13882 451 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 FAM153CQ494X1 144 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 STKLD1Q8NE28 680 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 BADQ92934 168 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 NKD2Q969F2 451 aaPredicted RBP19.72■□□□□ 0.75
SMC4-209ENST00000468653 KCTD15Q96SI1 283 aaPredicted RBP19.72■□□□□ 0.75
SMC4-209ENST00000468653 SLC9A7Q96T83 725 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 ABCC13Q9NSE7 274 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 FAM153AQ9UHL3 310 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 PATJQ8NI35 1801 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SOAT2O75908 522 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 HAPLN1P10915 354 aaPredicted RBP19.72■□□□□ 0.75
SMC4-209ENST00000468653 ECHS1P30084 290 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 ARL4AP40617 200 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms