RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 E2F7Q96AV8 911 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 SLC39A13Q96H72 371 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 GCNAQ96QF7 691 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 SELENOOQ9BVL4 669 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 LACRTQ9GZZ8 138 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSH5-214ENST00000468602 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 CHORDC1Q9UHD1 332 aaPredicted RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 STOML2Q9UJZ1 356 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 STAP1Q9ULZ2 295 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 ARHGAP26Q9UNA1 814 aa11.78□□□□□ -0.52
MSH5-214ENST00000468602 HBS1LQ9Y450 684 aaKnown RBP11.78□□□□□ -0.52
MSH5-214ENST00000468602 RCCD1A6NED2 376 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 TMCO5BA8MYB1 307 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 NRG2O14511 850 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 IRAK2O43187 625 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 MBTPS2O43462 519 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 KRT86O43790 486 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 CSPG5O95196 566 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 LATS1O95835 1130 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 FSHRP23945 695 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 PCK1P35558 622 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 AIF1P55008 147 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 RPL7AP62424 266 aaKnown RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 COG7P83436 770 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 KIF5AQ12840 1032 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 TAF5Q15542 800 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 TRIP4Q15650 581 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 OTUD1Q5VV17 481 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 SYPL2Q5VXT5 272 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 POTEHQ6S545 545 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 SLFN11Q7Z7L1 901 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 DDX42Q86XP3 938 aaKnown RBP eCLIP11.77□□□□□ -0.53
MSH5-214ENST00000468602 PSTKQ8IV42 348 aaKnown RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 DEFB106AQ8N104 65 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 SERPINB11Q96P15 392 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 ATXN3LQ9H3M9 355 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 PIDD1Q9HB75 910 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 DNMT3LQ9UJW3 386 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 CDH7Q9ULB5 785 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 MAGED2Q9UNF1 606 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 TLR6Q9Y2C9 796 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 PPP2R2CQ9Y2T4 447 aa11.77□□□□□ -0.53
MSH5-214ENST00000468602 MRPS23Q9Y3D9 190 aaKnown RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 USP15Q9Y4E8 981 aaPredicted RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 HELZP42694 1942 aaKnown RBP11.77□□□□□ -0.53
MSH5-214ENST00000468602 KIF26AQ9ULI4 1882 aaPredicted RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 REV3LO60673 3130 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 CCP110O43303 1012 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 COCHO43405 550 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 GREM1O60565 184 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 SLC2A3P11169 496 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 MYL4P12829 197 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 NCAM1P13591 858 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 PDGFRAP16234 1089 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 ABCB4P21439 1286 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 GPD1P21695 349 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 SLC1A1P43005 524 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 CXCR3P49682 368 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 CDR1P51861 262 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 ZNF252P-AS1Q0IIN9 211 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 PPP2R5DQ14738 602 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 IFI16Q16666 785 aaKnown RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 CCDC14Q49A88 953 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 BRMS1LQ5PSV4 323 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 LRRC38Q5VT99 294 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 FAM217AQ8IXS0 508 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 MAFAQ8NHW3 353 aaPredicted RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 JOSD2Q8TAC2 188 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 DQX1Q8TE96 717 aaKnown RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 RXFP2Q8WXD0 754 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 NDRG1Q92597 394 aaKnown RBP11.76□□□□□ -0.53
MSH5-214ENST00000468602 FGF13Q92913 245 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 NXPE3Q969Y0 559 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 NTAN1Q96AB6 310 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 FAM149B1Q96BN6 582 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 PLD4Q96BZ4 506 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 TCEAL4Q96EI5 215 aa11.76□□□□□ -0.53
MSH5-214ENST00000468602 RNF38Q9H0F5 515 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms