RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 Q6ZS52 159 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 ASCL5Q7RTU5 278 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 PPM1KQ8N3J5 372 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 ZNF276Q8N554 614 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 ZBTB44Q8NCP5 570 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 OTUB2Q96DC9 234 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.02
COL27A1-203ENST00000468565 ZSCAN32Q9NX65 697 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 ITIH6Q6UXX5 1313 aa15.21■□□□□ 0.02
COL27A1-203ENST00000468565 PBX1P40424 430 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 GALK1P51570 392 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 ADKP55263 362 aaKnown RBP15.2■□□□□ 0.02
COL27A1-203ENST00000468565 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 RAB41Q5JT25 222 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 SYT10Q6XYQ8 523 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 ADGRG2Q8IZP9 1017 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 ANKRD7Q92527 254 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 CD101Q93033 1021 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 NAA15Q9BXJ9 866 aaKnown RBP15.2■□□□□ 0.02
COL27A1-203ENST00000468565 ZFHX2Q9C0A1 2572 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-203ENST00000468565 NMUR1Q9HB89 426 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL27A1-203ENST00000468565 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 HESX1Q9UBX0 185 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 SH3BP1Q9Y3L3 701 aa15.2■□□□□ 0.02
COL27A1-203ENST00000468565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.2■□□□□ 0.022e-7■■■□□ 17.8
COL27A1-203ENST00000468565 A0A1W2PQH9 124 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 XPO1O14980 1071 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 TEX33O43247 280 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 CYP17A1P05093 508 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 CD19P15391 556 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ATP5C1P36542 298 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 NRLP54845 237 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ETF1P62495 437 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 SATB1Q01826 763 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 BST2Q10589 180 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 KRT31Q15323 416 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 FBXO43Q4G163 708 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 TSSK4Q6SA08 328 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 TADA2BQ86TJ2 420 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 PPP2R2CQ9Y2T4 447 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 PCDHB4Q9Y5E5 795 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 RIF1Q5UIP0 2472 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 KCNJ18B7U540 433 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 O00370 1275 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 LILRB5O75023 590 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 EGFP01133 1207 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 LMNAP02545 664 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 DHCR24Q15392 516 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 TCP11X2Q5H9J9 407 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 SCD5Q86SK9 330 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ARHGEF19Q8IW93 802 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 REXO1L1PQ8IX06 675 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ATRIPQ8WXE1 791 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 KAT5Q92993 513 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 KLF16Q9BXK1 252 aaPredicted RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 FBRSL1Q9HCM7 1045 aaKnown RBP15.19■□□□□ 0.02
COL27A1-203ENST00000468565 NAGPAQ9UK23 515 aa15.19■□□□□ 0.02
COL27A1-203ENST00000468565 ATG13O75143 517 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 SLU7O95391 586 aaKnown RBP15.18■□□□□ 0.02
COL27A1-203ENST00000468565 ADH1CP00326 375 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 SETSIPP0DME0 302 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 RALAP11233 206 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 RARGP13631 454 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 PDE4CQ08493 712 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 TRIM14Q14142 442 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 GAB4Q2WGN9 574 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 LCLAT1Q6UWP7 414 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 IRF2BP1Q8IU81 584 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 CNGA4Q8IV77 575 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 THAP9Q9H5L6 903 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 DNMT3LQ9UJW3 386 aa15.18■□□□□ 0.02
COL27A1-203ENST00000468565 CHURC1-FNTBB4DL54 471 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 TBX18O95935 607 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 OPRD1P41143 372 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 ZNF132P52740 706 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 STILQ15468 1287 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 NAIF1Q69YI7 327 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 PM20D1Q6GTS8 502 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 HTR3DQ70Z44 454 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 RBBP8NLQ8NC74 664 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 FAM81BQ96LP2 452 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 CNTN6Q9UQ52 1028 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 EML5Q05BV3 1969 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms