RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SLC7A14Q8TBB6 771 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 FNIP1Q8TF40 1166 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 GDPD5Q8WTR4 605 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 UBE2Q2Q8WVN8 375 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 CD101Q93033 1021 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 ZNF653Q96CK0 615 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 TRMT2BQ96GJ1 504 aaKnown RBP6.23□□□□□ -1.41
USP39-213ENST00000467885 ZNF512Q96ME7 567 aaPredicted RBP6.23□□□□□ -1.41
USP39-213ENST00000467885 WDR24Q96S15 920 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
USP39-213ENST00000467885 CNPY3Q9BT09 278 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 SELENOOQ9BVL4 669 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 MAGEB5Q9BZ81 275 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 TSGA10Q9BZW7 698 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 S1PR5Q9H228 398 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 FBXO44Q9H4M3 255 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 IGFLR1Q9H665 355 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 SYNCQ9H7C4 482 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 ABCC13Q9NSE7 274 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP39-213ENST00000467885 CLIC5Q9NZA1 410 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 IP6K2Q9UHH9 426 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 YIPF1Q9Y548 306 aa6.23□□□□□ -1.41
USP39-213ENST00000467885 CEP290O15078 2479 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 GOLGA6L9A6NEM1 432 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 I6L893 689 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 CCL16O15467 120 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CCP110O43303 1012 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 HSF2BPO75031 334 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CSPG5O95196 566 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 GLP2RO95838 553 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 IGLV3-25P01717 112 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 LTFP02788 710 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 POU2F2P09086 479 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 RARGP13631 454 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 TCF4P15884 667 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PRLRP16471 622 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 COMTP21964 271 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 IL1R2P27930 398 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 HOXA9P31269 272 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CA8P35219 290 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CCR2P41597 374 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SLC1A1P43005 524 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PTPN9P43378 593 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PPP3CCP48454 512 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 TAS2R40P59535 323 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 GNG11P61952 73 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 ZXDBP98169 803 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 DLX2Q07687 328 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 PTPROQ16827 1216 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 C15orf59Q2T9L4 293 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 PABPC1LQ4VXU2 614 aaKnown RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 ARHGAP29Q52LW3 1261 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 DCAF6Q58WW2 860 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PPM1LQ5SGD2 360 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 FAM102AQ5T9C2 384 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 ZNF697Q5TEC3 545 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 MEI1Q5TIA1 1274 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 OTUD1Q5VV17 481 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 TXNRD3NBQ6F5E7 133 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 DNAJC24Q6P3W2 148 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 DCUN1D2Q6PH85 259 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SYCE2Q6PIF2 218 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 LIAT1Q6ZQX7 453 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CYP4V2Q6ZWL3 525 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 TMC8Q8IU68 726 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SIX6OS1Q8N1H7 587 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SLC35F6Q8N357 371 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 TXLNBQ8N3L3 684 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 EFHBQ8N7U6 833 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 NIPA2Q8N8Q9 360 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 MSANTD4Q8NCY6 345 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CMASQ8NFW8 434 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 ZNF564Q8TBZ8 553 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 IPO4Q8TEX9 1081 aaKnown RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 OVCA2Q8WZ82 227 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 EDEM1Q92611 657 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PGAP3Q96FM1 320 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 HES6Q96HZ4 224 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CFAP57Q96MR6 1250 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CYP2S1Q96SQ9 504 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CDCA3Q99618 268 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 TLR10Q9BXR5 811 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 SLC46A2Q9BY10 475 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 GOLPH3Q9H4A6 298 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 NSUN3Q9H649 340 aaKnown RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 POPDC2Q9HBU9 364 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 ANLNQ9NQW6 1124 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 MAN1C1Q9NR34 630 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 GKN1Q9NS71 199 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP39-213ENST00000467885 HCFC1R1Q9NWW0 138 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 ZDHHC7Q9NXF8 308 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 GMIPQ9P107 970 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 CLEC1BQ9P126 229 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 NUDT5Q9UKK9 219 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 MAGED2Q9UNF1 606 aaPredicted RBP6.22□□□□□ -1.41
USP39-213ENST00000467885 HYOU1Q9Y4L1 999 aa6.22□□□□□ -1.41
USP39-213ENST00000467885 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms