RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ERLEC1Q96DZ1 483 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 XPO6Q96QU8 1125 aaKnown RBP22.2■■□□□ 1.14
COL9A3-207ENST00000467819 PNPLA8Q9NP80 782 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 HCN2Q9UL51 889 aa22.2■■□□□ 1.14
COL9A3-207ENST00000467819 ATXN2Q99700 1313 aaKnown RBP22.2■■□□□ 1.14
COL9A3-207ENST00000467819 FAM237AA0A1B0GTK4 181 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 CACNG3O60359 315 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 GABRG2P18507 467 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 RPL13P26373 211 aaKnown RBP22.19■■□□□ 1.14
COL9A3-207ENST00000467819 NTSR1P30989 418 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 ADAM9Q13443 819 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 UAP1L1Q3KQV9 507 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 ZNF394Q53GI3 561 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 TRIM61Q5EBN2 209 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 KRBA2Q6ZNG9 492 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 GUF1Q8N442 669 aaKnown RBP22.19■■□□□ 1.14
COL9A3-207ENST00000467819 CCDC150Q8NCX0 1101 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 BHMTQ93088 406 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 GOLPH3LQ9H4A5 285 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 TMEM8AQ9HCN3 771 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.19■■□□□ 1.14
COL9A3-207ENST00000467819 DNMT3LQ9UJW3 386 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 NAGPAQ9UK23 515 aa22.19■■□□□ 1.14
COL9A3-207ENST00000467819 CDX4O14627 284 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-207ENST00000467819 KIF11P52732 1056 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 PPP1R26Q5T8A7 1209 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-207ENST00000467819 SH3PXD2AQ5TCZ1 1133 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 LYSMD4Q5XG99 296 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 TOGARAM2Q6ZUX3 1019 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 CHPFQ8IZ52 775 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 ACOX2Q99424 681 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 TMEM74BQ9NUR3 256 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 MARK1Q9P0L2 795 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 CALCOCO1Q9P1Z2 691 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 WDR35Q9P2L0 1181 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 EVLQ9UI08 416 aaPredicted RBP22.18■■□□□ 1.14
COL9A3-207ENST00000467819 STARD13Q9Y3M8 1113 aa22.18■■□□□ 1.14
COL9A3-207ENST00000467819 PLA2G4AP47712 749 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 SHC2P98077 582 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 KLHDC10Q6PID8 442 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 SCD5Q86SK9 330 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 SYT12Q8IV01 421 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 DEFB119Q8N690 84 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 EEF2KMTQ96G04 330 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 NUSAP1Q9BXS6 441 aaKnown RBP22.17■■□□□ 1.14
COL9A3-207ENST00000467819 DUSP16Q9BY84 665 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 DNAI2Q9GZS0 605 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 PLK2Q9NYY3 685 aa22.17■■□□□ 1.14
COL9A3-207ENST00000467819 FRYQ5TBA9 3013 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 A0A1W2PQF6 199 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 PRRT4C9JH25 899 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 ITPKAP23677 461 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 MAPK8P45983 427 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 DGKGP49619 791 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 RPL6Q02878 288 aaKnown RBP22.16■■□□□ 1.14
COL9A3-207ENST00000467819 ZNF252P-AS1Q0IIN9 211 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 ZCWPW2Q504Y3 356 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 KRT39Q6A163 491 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 SDE2Q6IQ49 451 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 CCDC186Q7Z3E2 898 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 SMYD4Q8IYR2 804 aaPredicted RBP22.16■■□□□ 1.14
COL9A3-207ENST00000467819 SEMA4DQ92854 862 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 HEXIM2Q96MH2 286 aaKnown RBP22.16■■□□□ 1.14
COL9A3-207ENST00000467819 RASAL2Q9UJF2 1139 aa22.16■■□□□ 1.14
COL9A3-207ENST00000467819 AP5Z1O43299 807 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 STC2O76061 302 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 RALAP11233 206 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 PSEN1P49768 467 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 MXI1P50539 228 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 ENPEPQ07075 957 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 LMAN2Q12907 356 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 SPDYCQ5MJ68 293 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 KIAA1211LQ6NV74 962 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 Q6ZNB5 142 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 TADA2BQ86TJ2 420 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 IPO4Q8TEX9 1081 aaKnown RBP22.15■■□□□ 1.14
COL9A3-207ENST00000467819 SCAND2PQ9GZW5 306 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-207ENST00000467819 RAD54BQ9Y620 910 aa22.15■■□□□ 1.14
COL9A3-207ENST00000467819 A0A1W2PQ27 194 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 A0A1W2PQ64 194 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 A0A1W2PQD8 194 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 ZBTB24O43167 697 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-207ENST00000467819 ZNF202O95125 648 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 CFIP05156 583 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 HMBSP08397 361 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 ENGP17813 658 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 NDUFV2P19404 249 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 GTF2H1P32780 548 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 SLC36A4Q6YBV0 504 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 ARID3AQ99856 593 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 GDPD2Q9HCC8 539 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 CISHQ9NSE2 258 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 CACNA2D2Q9NY47 1150 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 PILRBQ9UKJ0 227 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 CYP8B1Q9UNU6 501 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 USP3Q9Y6I4 520 aa22.14■■□□□ 1.13
COL9A3-207ENST00000467819 CACNA1EQ15878 2313 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 IGHV1OR15-9A0A0B4J2B8 117 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 CISD3P0C7P0 127 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 DPP6P42658 865 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms