RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 KREMEN1Q96MU8 473 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 PNKPQ96T60 521 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 TUBGCP2Q9BSJ2 902 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 NACA2Q9H009 215 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 DUSP15Q9H1R2 295 aaPredicted RBP14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 ANO10Q9NW15 660 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 TSPAN16Q9UKR8 245 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 MMP17Q9ULZ9 603 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 SCML2Q9UQR0 700 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 NFE2L3Q9Y4A8 694 aa14.79□□□□□ -0.04
CCHCR1-211ENST00000467553 SDK1Q7Z5N4 2213 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 KCNJ18B7U540 433 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 CYP26A1O43174 497 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 COCHO43405 550 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 APODP05090 189 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 CYP17A1P05093 508 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 PAEPP09466 180 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 ZDHHC11BP0C7U3 371 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 MPLP40238 635 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 GRIA2P42262 883 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 KIF11P52732 1056 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 MFAP3P55082 362 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 PDE4CQ08493 712 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 KCNJ12Q14500 433 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 ARHGAP44Q17R89 818 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 VWA3BQ502W6 1294 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 PPM1JQ5JR12 505 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 GJB7Q6PEY0 223 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 PIGZQ86VD9 579 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 TTC30AQ86WT1 665 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 UBXN6Q9BZV1 441 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 NDST4Q9H3R1 872 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 TMEM63CQ9P1W3 806 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 LAMA1P25391 3075 aa14.78□□□□□ -0.04
CCHCR1-211ENST00000467553 TPRP12270 2363 aaKnown RBP14.77□□□□□ -0.04
CCHCR1-211ENST00000467553 A0A1W2PQH9 124 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TULP2O00295 520 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 SCAMP3O14828 347 aaKnown RBP14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 GDF9O60383 454 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TBX18O95935 607 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 ADH5P11766 374 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 BRD2P25440 801 aaKnown RBP14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 PON1P27169 355 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 USP8P40818 1118 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 DPP6P42658 865 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 BCAT1P54687 386 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 APBA1Q02410 837 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 GAD2Q05329 585 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 CRY1Q16526 586 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 GAB4Q2WGN9 574 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TCP11X2Q5H9J9 407 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 SPDYCQ5MJ68 293 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 EOGTQ5NDL2 527 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 NAIF1Q69YI7 327 aaPredicted RBP14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TRIM65Q6PJ69 517 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 RHBDF2Q6PJF5 856 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TRMT11Q7Z4G4 463 aaKnown RBP14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 TFAP2BQ92481 460 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 NMUR1Q9HB89 426 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 CFAP97Q9P2B7 532 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 NUDT5Q9UKK9 219 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.05
CCHCR1-211ENST00000467553 ACACBO00763 2458 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 CNOT1A5YKK6 2376 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 BCLAF3A2AJT9 711 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 O00370 1275 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 TM4SF5O14894 197 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 XPO1O14980 1071 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 TLR5O60602 858 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 KAT7O95251 611 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 RARGP13631 454 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 TKTL1P51854 596 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 BST2Q10589 180 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 CNGA2Q16280 664 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 STX1AQ16623 288 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 C2orf27AQ580R0 203 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 STPG1Q5TH74 334 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 LCLAT1Q6UWP7 414 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 C11orf57Q6ZUT1 292 aaPredicted RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 ENOSF1Q7L5Y1 443 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 VPS16Q9H269 839 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 LRRC4Q9HBW1 653 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 POLMQ9NP87 494 aaPredicted RBP14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 OSER1Q9NX31 292 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 TAB2Q9NYJ8 693 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 APEX2Q9UBZ4 518 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 NAGPAQ9UK23 515 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 USP3Q9Y6I4 520 aa14.76□□□□□ -0.05
CCHCR1-211ENST00000467553 NUP205Q92621 2012 aa14.75□□□□□ -0.05
CCHCR1-211ENST00000467553 GTPBP10A4D1E9 387 aaKnown RBP14.75□□□□□ -0.05
CCHCR1-211ENST00000467553 HOXC11O43248 304 aaPredicted RBP14.75□□□□□ -0.05
CCHCR1-211ENST00000467553 CAVIN2O95810 425 aa14.75□□□□□ -0.05
CCHCR1-211ENST00000467553 IRF1P10914 325 aa14.75□□□□□ -0.05
CCHCR1-211ENST00000467553 HOXC13P31276 330 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms