RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 VPS45Q9NRW7 570 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 EHD3Q9NZN3 535 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 IFT80Q9P2H3 777 aaPredicted RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 DNMT3BQ9UBC3 853 aaKnown RBP4.78□□□□□ -1.64
SMC4-208ENST00000467468 FEM1BQ9UK73 627 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 SHOC2Q9UQ13 582 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 COX11Q9Y6N1 276 aa4.78□□□□□ -1.64
SMC4-208ENST00000467468 ITIH6Q6UXX5 1313 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ADGRA2Q96PE1 1338 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 TISP43B9A030 160 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ADM5C9JUS6 153 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 FCHO1O14526 889 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 HOXC11O43248 304 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 RRP9O43818 475 aaKnown RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 NTSR2O95665 410 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 TTLL1O95922 423 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 HSP90AA1P07900 732 aaKnown RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 CNTFP26441 200 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ATICP31939 592 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 PXNP49023 591 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 TOB1P50616 345 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 BOP1Q14137 746 aaKnown RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 ZNF750Q32MQ0 723 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 MGAT5BQ3V5L5 792 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ANKRD45Q5TZF3 282 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ICE2Q659A1 982 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 SYCE2Q6PIF2 218 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 TMEM108Q6UXF1 575 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 ZNF575Q86XF7 245 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 SLC44A2Q8IWA5 706 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 OR1N1Q8NGS0 311 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 RILPL2Q969X0 211 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 SDCCAG3Q96C92 435 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 AMBRA1Q9C0C7 1298 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 SEMA4GQ9NTN9 838 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 LPAR3Q9UBY5 353 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 FBXO2Q9UK22 296 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 ENTPD2Q9Y5L3 495 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 CDY1Q9Y6F8 540 aa4.77□□□□□ -1.65
SMC4-208ENST00000467468 COL11A2P13942 1736 aaPredicted RBP4.77□□□□□ -1.65
SMC4-208ENST00000467468 HMX3A6NHT5 357 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 MGST3O14880 152 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 SNX2O60749 519 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 COQ9O75208 318 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 PIAS2O75928 621 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 CD4P01730 458 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 XBP1P17861 261 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 CAPN3P20807 821 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 GPD1P21695 349 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 FBLP22087 321 aaKnown RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 PPIFP30405 207 aaKnown RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 LRPAP1P30533 357 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 ELF1P32519 619 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 ALDH18A1P54886 795 aaKnown RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 AP2B1P63010 937 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 ZNF618Q5T7W0 954 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 FAAH2Q6GMR7 532 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 FAM180BQ6P0A1 224 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 ARHGEF25Q86VW2 580 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 CCDC117Q8IWD4 279 aaPredicted RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 FAM109AQ8N4B1 249 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 PCYOX1LQ8NBM8 494 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 SCAMP5Q8TAC9 235 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 ZNF764Q96H86 408 aaPredicted RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 FAM227BQ96M60 508 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 BBC3Q96PG8 261 aaPredicted RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 INO80BQ9C086 356 aaPredicted RBP4.76□□□□□ -1.65
SMC4-208ENST00000467468 TWSG1Q9GZX9 223 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 R3HDMLQ9H3Y0 253 aa4.76□□□□□ -1.65
SMC4-208ENST00000467468 WDR27A2RRH5 827 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 A6NLC8 198 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 PROP1O75360 226 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 RNASEH2AO75792 299 aaKnown RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 USP1O94782 785 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 IGLV2-14P01704 120 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 TK1P04183 234 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 GYS1P13807 737 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ZFXP17010 805 aaPredicted RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 WT1P19544 449 aaPredicted RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 LIFRP42702 1097 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 HNRNPMP52272 730 aaKnown RBP eCLIP4.75□□□□□ -1.652e-9■□□□□ 8.7
SMC4-208ENST00000467468 PRKAA2P54646 552 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ACTR2P61160 394 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 VAMP2P63027 116 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ATP1A4Q13733 1029 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 BMPR2Q13873 1038 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 KCNAB1Q14722 419 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 TBCCQ15814 346 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ZIK1Q3SY52 487 aaPredicted RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 TRIM60Q495X7 471 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 TSTD2Q5T7W7 516 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ATPAF1Q5TC12 328 aaPredicted RBP4.75□□□□□ -1.65
SMC4-208ENST00000467468 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 CACHD1Q5VU97 1274 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 MZT2BQ6NZ67 158 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 KCTD20Q7Z5Y7 419 aa4.75□□□□□ -1.65
SMC4-208ENST00000467468 ZNF280BQ86YH2 543 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms