RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 STARD6P59095 220 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ARID5AQ03989 594 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 PRKCQQ04759 706 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 TNK2Q07912 1038 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 EFEMP1Q12805 493 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 PTP4A2Q12974 167 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 NNTQ13423 1086 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ARID5BQ14865 1188 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ASIC2Q16515 512 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 CLEC16AQ2KHT3 1053 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 GAB4Q2WGN9 574 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 BTBD8Q5XKL5 378 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 HGSNATQ68CP4 663 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 SPECC1LQ69YQ0 1117 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 TOGARAM2Q6ZUX3 1019 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 XYLT1Q86Y38 959 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 MIB1Q86YT6 1006 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ZDHHC17Q8IUH5 632 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ZNF687Q8N1G0 1237 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 EDEM1Q92611 657 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 ATP2A3Q93084 1043 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 SLC2A13Q96QE2 648 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 NACA2Q9H009 215 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 HEBP1Q9NRV9 189 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 GKN1Q9NS71 199 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 FBXL21Q9UKT6 434 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 CA14Q9ULX7 337 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 CAPN11Q9UMQ6 739 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 HBS1LQ9Y450 684 aaKnown RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 SLC9A3R1O14745 358 aaPredicted RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 HSF2BPO75031 334 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 DAB1O75553 588 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 CYP17A1P05093 508 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 GLULP15104 373 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 HNRNPH3P31942 346 aaKnown RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 CTHP32929 405 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 IFNAR2P48551 515 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 SNX16P57768 344 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 YWHAZP63104 245 aaKnown RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 ZBED6P86452 979 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 TRIM14Q14142 442 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 TAF5Q15542 800 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 ITPRIPL2Q3MIP1 535 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 SFMBT2Q5VUG0 894 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 CC2D1AQ6P1N0 951 aaPredicted RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 MON1BQ7L1V2 547 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 RSRC2Q7L4I2 434 aaKnown RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 PHF13Q86YI8 300 aaPredicted RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 FAM217AQ8IXS0 508 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 FAM149B1Q96BN6 582 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 PLD4Q96BZ4 506 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 OTUB2Q96DC9 234 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 AGPAT1Q99943 283 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 NUCKS1Q9H1E3 243 aaKnown RBP11.55□□□□□ -0.56
MSH5-212ENST00000467319 PDCL3Q9H2J4 239 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 EBF3Q9H4W6 596 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 TBC1D17Q9HA65 648 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 POPDC2Q9HBU9 364 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 PIAS3Q9Y6X2 628 aa11.55□□□□□ -0.56
MSH5-212ENST00000467319 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 GFRA2O00451 464 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 IRAK2O43187 625 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 MSI1O43347 362 aaKnown RBP11.54□□□□□ -0.56
MSH5-212ENST00000467319 NFATC1O95644 943 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 KLKB1P03952 638 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 IRF1P10914 325 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SOX9P48436 509 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 COG7P83436 770 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SLC6A3Q01959 620 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 RING1Q06587 406 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 GOLGA8FQ08AF8 430 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 GOLGA8DPQ0D2H9 430 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 EIF4EBP2Q13542 120 aaPredicted RBP11.54□□□□□ -0.56
MSH5-212ENST00000467319 RUNX3Q13761 415 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 TMEM31Q5JXX7 168 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 SYPL2Q5VXT5 272 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 TXNDC11Q6PKC3 985 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 TPRG1Q6ZUI0 275 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
MSH5-212ENST00000467319 TAC4Q86UU9 113 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 RALGPS2Q86X27 583 aaPredicted RBP11.54□□□□□ -0.56
MSH5-212ENST00000467319 ERICH1Q86X53 443 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 CPA6Q8N4T0 437 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 RNF139Q8WU17 664 aa11.54□□□□□ -0.56
MSH5-212ENST00000467319 CPA5Q8WXQ8 436 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms