RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TXNL4AP83876 142 aaKnown RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 GPS1Q13098 491 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF268Q14587 947 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 ACOX1Q15067 660 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 HSP90AB2PQ58FF8 381 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 FAXCQ5TGI0 409 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 MEX3CQ5U5Q3 659 aaKnown RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 ABLIM2Q6H8Q1 611 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 ZNF425Q6IV72 752 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 VSTM1Q6UX27 236 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 RANBP10Q6VN20 620 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 KIAA0408Q6ZU52 694 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 CNGA4Q8IV77 575 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 P3H2Q8IVL5 708 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 CCDC150Q8NCX0 1101 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 PRR11Q96HE9 360 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 FAM118BQ9BPY3 351 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 VPS45Q9NRW7 570 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 FZD4Q9ULV1 537 aa4.6□□□□□ -1.67
VPS13D-203ENST00000466732 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
VPS13D-203ENST00000466732 FCHO1O14526 889 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 DSCR3O14972 297 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 FYB1O15117 783 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 TP73O15350 636 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 NCK2O43639 380 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CCNT2O60583 730 aaKnown RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CBFA2T3O75081 653 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CAND2O75155 1236 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 GABRB3P28472 473 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 PBX1P40424 430 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CCDC15Q0P6D6 951 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 DNASE1L3Q13609 305 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 SEC23BQ15437 767 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 ETFDHQ16134 617 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 AASDHQ4L235 1098 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 FAM209BQ5JX69 171 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 RAP1GAP2Q684P5 730 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 MRNIPQ6NTE8 343 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 C11orf87Q6NUJ2 197 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 HIBCHQ6NVY1 386 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 USP17L6PQ6QN14 398 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CCDC28AQ8IWP9 274 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 FAM71DQ8N9W8 422 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 OSR1Q8TAX0 266 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 ABHD5Q8WTS1 349 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 SNX27Q96L92 541 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 WDR24Q96S15 920 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 CINPQ9BW66 212 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 SAP30LQ9HAJ7 183 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 TMOD4Q9NZQ9 345 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 ZMYND8Q9ULU4 1186 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-203ENST00000466732 MAN2B2Q9Y2E5 1009 aa4.59□□□□□ -1.67
VPS13D-203ENST00000466732 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 RNF8O76064 485 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 NDST3O95803 873 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 MBPP02686 304 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 CENPBP07199 599 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 HARSP12081 509 aaKnown RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 TNFSF4P23510 183 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 ATP5F1P24539 256 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 MST1P26927 711 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 SLC5A2P31639 672 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 GALNSP34059 522 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 TM4SF4P48230 202 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 DGKQP52824 942 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 SLC14A1Q13336 389 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 PMS2P11Q13670 270 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 LONRF1Q17RB8 773 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 ARL13BQ3SXY8 428 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 TMTC4Q5T4D3 741 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 PAPD7Q5XG87 772 aaKnown RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 DPP9Q86TI2 863 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 TXLNBQ8N3L3 684 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-203ENST00000466732 DENND1AQ8TEH3 1009 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 PARD3BQ8TEW8 1205 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 SCARB1Q8WTV0 552 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 MAP4K1Q92918 833 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 HIC2Q96JB3 615 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 GDF15Q99988 308 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 PCDHAC1Q9H158 963 aa4.58□□□□□ -1.68
VPS13D-203ENST00000466732 RASA4BC9J798 803 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 E5RJQ4 531 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 RASA4O43374 803 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 PRC1O43663 620 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
VPS13D-203ENST00000466732 KRT18P05783 430 aaKnown RBP4.57□□□□□ -1.68
VPS13D-203ENST00000466732 NBPF7P0C2Y1 421 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-203ENST00000466732 IDEP14735 1019 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 KCNJ12Q14500 433 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 SLC35G1Q2M3R5 365 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 Q4G0T1 1027 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 CC2D1BQ5T0F9 858 aaKnown RBP4.57□□□□□ -1.68
VPS13D-203ENST00000466732 KRT73Q86Y46 540 aa4.57□□□□□ -1.68
VPS13D-203ENST00000466732 GLIS1Q8NBF1 620 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms