RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 BYSLQ13895 437 aaKnown RBP20.17■□□□□ 0.82
COL9A3-206ENST00000466532 C10orf120Q5SQS8 335 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 KLHDC10Q6PID8 442 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 PIGKQ92643 395 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 SEMA4DQ92854 862 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 EEF2KMTQ96G04 330 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 MARK1Q9P0L2 795 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 WDR35Q9P2L0 1181 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
COL9A3-206ENST00000466532 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 C4orf47A7E2U8 309 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 KCNK5O95279 499 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 EPB41P11171 864 aaKnown RBP20.16■□□□□ 0.82
COL9A3-206ENST00000466532 WASP42768 502 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 PLA2G4AP47712 749 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 PSEN1P49768 467 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 MCCD1P59942 119 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-206ENST00000466532 MAP7D1Q3KQU3 841 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 ARMCX6Q7L4S7 300 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 CCDC186Q7Z3E2 898 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 SCD5Q86SK9 330 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 TADA2BQ86TJ2 420 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 TMEFF1Q8IYR6 380 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 FBXL13Q8NEE6 735 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 HEXIM2Q96MH2 286 aaKnown RBP20.16■□□□□ 0.82
COL9A3-206ENST00000466532 MBD1Q9UIS9 605 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-206ENST00000466532 HCN2Q9UL51 889 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 STARD13Q9Y3M8 1113 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 GON4LQ3T8J9 2241 aa20.16■□□□□ 0.82
COL9A3-206ENST00000466532 CACNA1BQ00975 2339 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 MAP1BP46821 2468 aaKnown RBP20.15■□□□□ 0.82
COL9A3-206ENST00000466532 KMT2BQ9UMN6 2715 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-206ENST00000466532 CETN3O15182 167 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 STX10O60499 249 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 RALAP11233 206 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 NTSR1P30989 418 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 PNOCQ13519 176 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 EGFLAMQ63HQ2 1017 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 MIB1Q86YT6 1006 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 TTC39CQ8N584 583 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 FAXDC2Q96IV6 333 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 TMEM9BQ9NQ34 198 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 CISHQ9NSE2 258 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 RAB20Q9NX57 234 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 USP3Q9Y6I4 520 aa20.15■□□□□ 0.82
COL9A3-206ENST00000466532 ASCC3Q8N3C0 2202 aaKnown RBP20.14■□□□□ 0.81
COL9A3-206ENST00000466532 STC2O76061 302 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 GABRG2P18507 467 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 PMLP29590 882 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 PTGER3P43115 390 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 DGKGP49619 791 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 DAB2IPQ5VWQ8 1189 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 SDE2Q6IQ49 451 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 PSAPL1Q6NUJ1 521 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 Q6ZNB5 142 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 TOGARAM2Q6ZUX3 1019 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 CHPFQ8IZ52 775 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 ZNF276Q8N554 614 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 SLC4A11Q8NBS3 891 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 BHMTQ93088 406 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 TMEM176AQ96HP8 235 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 ACOX2Q99424 681 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 ARID3AQ99856 593 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 RMND1Q9NWS8 449 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 CLIC5Q9NZA1 410 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 RASAL2Q9UJF2 1139 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 ANGPTL2Q9UKU9 493 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 EPG5Q9HCE0 2579 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 CHD8Q9HCK8 2581 aa20.14■□□□□ 0.81
COL9A3-206ENST00000466532 PRRT4C9JH25 899 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 RAD23BP54727 409 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 IRX4P78413 519 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 TRIM61Q5EBN2 209 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 SPDYCQ5MJ68 293 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 TCERG1LQ5VWI1 586 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 CDK5RAP1Q96SZ6 601 aaKnown RBP20.13■□□□□ 0.81
COL9A3-206ENST00000466532 PLK2Q9NYY3 685 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 CALCOCO1Q9P1Z2 691 aa20.13■□□□□ 0.81
COL9A3-206ENST00000466532 EVLQ9UI08 416 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-206ENST00000466532 ATXN2Q99700 1313 aaKnown RBP20.12■□□□□ 0.81
COL9A3-206ENST00000466532 A0A1W2PQF6 199 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 ZBTB24O43167 697 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-206ENST00000466532 CISD3P0C7P0 127 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 PRCPP42785 496 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 NOVA1P51513 510 aaKnown RBP20.12■□□□□ 0.81
COL9A3-206ENST00000466532 EFEMP1Q12805 493 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 DCAF17Q5H9S7 520 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-206ENST00000466532 LYSMD4Q5XG99 296 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 ARHGAP17Q68EM7 881 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 SYT12Q8IV01 421 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 TATDN2Q93075 761 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 ERLEC1Q96DZ1 483 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 TSG101Q99816 390 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 NUSAP1Q9BXS6 441 aaKnown RBP20.12■□□□□ 0.81
COL9A3-206ENST00000466532 UBXN6Q9BZV1 441 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 TMEM74BQ9NUR3 256 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 ZNF510Q9Y2H8 683 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 CKAP5Q14008 2032 aa20.12■□□□□ 0.81
COL9A3-206ENST00000466532 CDX4O14627 284 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-206ENST00000466532 AP5Z1O43299 807 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms