RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 B4GALT5O43286 388 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TJP3O95049 919 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 F9P00740 461 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 KLRC2P26717 231 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 MAGOHP61326 146 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ST8SIA6P61647 398 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 AP1B1Q10567 949 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 MED21Q13503 144 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ZNF268Q14587 947 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 NAIF1Q69YI7 327 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 LCA5Q86VQ0 697 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 NPAS4Q8IUM7 802 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ICA1LQ8NDH6 482 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 GANCQ8TET4 914 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CDKL2Q92772 493 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TMEM176AQ96HP8 235 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 GOLPH3Q9H4A6 298 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 NOD2Q9HC29 1040 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 OLA1Q9NTK5 396 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ZFP69BQ9UJL9 534 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 BARX2Q9UMQ3 279 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 OR6C75A6NL08 312 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 DEAF1O75398 565 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 SASH3O75995 380 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 AGTP01019 485 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 MMP8P22894 467 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 OVOS1Q6IE37 1185 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TMEM154Q6P9G4 183 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 DCLRE1AQ6PJP8 1040 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CCDC80Q76M96 950 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ARHGAP22Q7Z5H3 698 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 OLIG1Q8TAK6 271 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CASKIN2Q8WXE0 1202 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 C18orf8Q96DM3 657 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 SEPT5Q99719 369 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 EPAS1Q99814 870 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ERP44Q9BS26 406 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TRAIPQ9BWF2 469 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ST3GAL5Q9UNP4 418 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TSC22D4Q9Y3Q8 395 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 PTPRJQ12913 1337 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CCT8L1PA6NM43 557 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 H3BRJ5 948 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 KRT75O95678 551 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 PSMA2P25787 234 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ARL1P40616 181 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ASPAP45381 313 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 MAMLD1Q13495 774 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 RCN2Q14257 317 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 GEN1Q17RS7 908 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 USP41Q3LFD5 358 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 UNC93AQ86WB7 457 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 PASD1Q8IV76 773 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 RYBPQ8N488 228 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 C11orf84Q9BUA3 381 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 FOXP3Q9BZS1 431 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 UBXN6Q9BZV1 441 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TRIM15Q9C019 465 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ELOVL4Q9GZR5 314 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 PARVBQ9HBI1 364 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 UTP6Q9NYH9 597 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 LMCD1Q9NZU5 365 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ZNF197O14709 1029 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 SLC9A3R1O14745 358 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 TTI1O43156 1089 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ATMINO43313 823 aaPredicted RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 NFICP08651 508 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 FAM163BP0C2L3 166 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ADORA2BP29275 332 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ETFBP38117 255 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 INPP1P49441 399 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 BCAT1P54687 386 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 PSMC1P62191 440 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 TLE2Q04725 743 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 AMHR2Q16671 573 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CYP1B1Q16678 543 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 ZNF394Q53GI3 561 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 DDX42Q86XP3 938 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP54-210ENST00000466048 ADGRF2Q8IZF7 708 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CD101Q93033 1021 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 CPB2Q96IY4 423 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 TTC25Q96NG3 672 aa7.94□□□□□ -1.14
USP54-210ENST00000466048 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
USP54-210ENST00000466048 ZSWIM8A7E2V4 1837 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 MBLAC1A4D2B0 266 aaPredicted RBP7.93□□□□□ -1.14
USP54-210ENST00000466048 APOA1P02647 267 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 GLI1P08151 1106 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 CYP3A5P20815 502 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 PEX5P50542 639 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
USP54-210ENST00000466048 RPS6KA2Q15349 733 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 CNGA2Q16280 664 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 CCDC137Q6PK04 289 aaKnown RBP7.93□□□□□ -1.14
USP54-210ENST00000466048 FNIP1Q8TF40 1166 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 PTPN18Q99952 460 aa7.93□□□□□ -1.14
USP54-210ENST00000466048 R3HDMLQ9H3Y0 253 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms