RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 SIX2Q9NPC8 291 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 DDX43Q9NXZ2 648 aaKnown RBP9.99□□□□□ -0.81
ATG3-203ENST00000465980 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 ITGA11Q9UKX5 1188 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 MAGED2Q9UNF1 606 aaPredicted RBP9.99□□□□□ -0.81
ATG3-203ENST00000465980 DOLKQ9UPQ8 538 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 MRPS17Q9Y2R5 130 aaKnown RBP9.99□□□□□ -0.81
ATG3-203ENST00000465980 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
ATG3-203ENST00000465980 PCDHB5Q9Y5E4 795 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.99□□□□□ -0.81
ATG3-203ENST00000465980 PIAS3Q9Y6X2 628 aa9.99□□□□□ -0.81
ATG3-203ENST00000465980 CNOT1A5YKK6 2376 aaKnown RBP9.99□□□□□ -0.81
ATG3-203ENST00000465980 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 LAMA1P25391 3075 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 SHISA7A6NL88 538 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 TNNC2P02585 160 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 UCHL3P15374 230 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 COL8A1P27658 744 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 KPNA1P52294 538 aaPredicted RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 RBP5P82980 135 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 CCZ1BP86790 482 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 CCZ1P86791 482 aaPredicted RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 APBA1Q02410 837 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 LRMPQ12912 555 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 DUOXA2Q1HG44 320 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 FIGNL1Q6PIW4 674 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 ZC3H14Q6PJT7 736 aaKnown RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 CACNA2D4Q7Z3S7 1137 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 TMEM139Q8IV31 216 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 ADGRF2Q8IZF7 708 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 MAML2Q8IZL2 1156 aaPredicted RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 LRRC52Q8N7C0 313 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 CSGALNACT1Q8TDX6 532 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 TAS1R2Q8TE23 839 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 ZNF830Q96NB3 372 aaPredicted RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 LRRC3BQ96PB8 259 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 HINFPQ9BQA5 517 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 NAA15Q9BXJ9 866 aaKnown RBP9.98□□□□□ -0.81
ATG3-203ENST00000465980 OSBPL6Q9BZF3 934 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 TRPV4Q9HBA0 871 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 ABHD10Q9NUJ1 306 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 RAB20Q9NX57 234 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 MYO6Q9UM54 1294 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 NCOR2Q9Y618 2525 aa9.98□□□□□ -0.81
ATG3-203ENST00000465980 EML5Q05BV3 1969 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 MAN2B1O00754 1011 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 NCAM2O15394 837 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 NRDCO43847 1150 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 BNIP3LO60238 219 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 FGF19O95750 216 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 HLA-DRAP01903 254 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 LMNAP02545 664 aaKnown RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 CYP2F1P24903 491 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 CDC25CP30307 473 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 HNRNPH3P31942 346 aaKnown RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 PSMC1P62191 440 aaKnown RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 TNK2Q07912 1038 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 MTAPQ13126 283 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 BIRC3Q13489 604 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 TLR1Q15399 786 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 DDR2Q16832 855 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 TRAPPC11Q7Z392 1133 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 CXorf38Q8TB03 319 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 C2orf15Q8WU43 125 aaKnown RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 FAM3CQ92520 227 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 SEMA4DQ92854 862 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 CLDN23Q96B33 292 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 HPDLQ96IR7 371 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 NELL2Q99435 816 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 BAG1Q99933 345 aaPredicted RBP9.97□□□□□ -0.81
ATG3-203ENST00000465980 TASP1Q9H6P5 420 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 NLRC4Q9NPP4 1024 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 HSFX1Q9UBD0 423 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 APEX2Q9UBZ4 518 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 GTF3C4Q9UKN8 822 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 ZKSCAN5Q9Y2L8 839 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 FHOD1Q9Y613 1164 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 KIAA1549LQ6ZVL6 1849 aa9.97□□□□□ -0.81
ATG3-203ENST00000465980 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.81
ATG3-203ENST00000465980 LRRC53A6NM62 1247 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 ARNTLO00327 626 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 CHADO15335 359 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 PHACTR2O75167 634 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 ATP2C2O75185 946 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 CLSTN1O94985 981 aa9.96□□□□□ -0.82
ATG3-203ENST00000465980 VNN1O95497 513 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms