RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
APTX-213ENST00000465003 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
APTX-213ENST00000465003 MARCH2Q9P0N8 246 aa12.43□□□□□ -0.42
APTX-213ENST00000465003 CALCOCO1Q9P1Z2 691 aa12.43□□□□□ -0.42
APTX-213ENST00000465003 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
APTX-213ENST00000465003 SORCS3Q9UPU3 1222 aa12.43□□□□□ -0.42
APTX-213ENST00000465003 SLC12A8A0AV02 714 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 ECI2O75521 394 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 FBXO21O94952 628 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 CD72P21854 359 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 MMP8P22894 467 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 SLC7A9P82251 487 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 PTP4A2Q12974 167 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 TRIM14Q14142 442 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 MTF1Q14872 753 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 NAIF1Q69YI7 327 aaPredicted RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 MON1BQ7L1V2 547 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 CELF5Q8N6W0 485 aaKnown RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 RNF139Q8WU17 664 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 BHMTQ93088 406 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 TRMT61BQ9BVS5 477 aaKnown RBP12.42□□□□□ -0.42
APTX-213ENST00000465003 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 ADAM22Q9P0K1 906 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 ARHGAP26Q9UNA1 814 aa12.42□□□□□ -0.42
APTX-213ENST00000465003 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 CAPN9O14815 690 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
APTX-213ENST00000465003 SERPING1P05155 500 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 TPM1P09493 284 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 ABCB4P21439 1286 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 FLT3P36888 993 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 TUBP50607 506 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
APTX-213ENST00000465003 SLC6A3Q01959 620 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 USP4Q13107 963 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 JOSD2Q8TAC2 188 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 DQX1Q8TE96 717 aaKnown RBP12.41□□□□□ -0.42
APTX-213ENST00000465003 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
APTX-213ENST00000465003 EPHX3Q9H6B9 360 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 GRPEL1Q9HAV7 217 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 ABCC13Q9NSE7 274 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 CLIC5Q9NZA1 410 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 STC2O76061 302 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 KLKB1P03952 638 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 RRM1P23921 792 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 GABRB2P47870 512 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 PSEN1P49768 467 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 YWHAZP63104 245 aaKnown RBP12.41□□□□□ -0.42
APTX-213ENST00000465003 CFAP57Q96MR6 1250 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 DUSP12Q9UNI6 340 aa12.41□□□□□ -0.42
APTX-213ENST00000465003 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 GREM1O60565 184 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 TECTAO75443 2155 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 GGCXP38435 758 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 RPL7AP62424 266 aaKnown RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 FCHO2Q0JRZ9 810 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 NME3Q13232 169 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 CDO1Q16878 200 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 SH3PXD2AQ5TCZ1 1133 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 OTUD1Q5VV17 481 aaPredicted RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 ACAD10Q6JQN1 1059 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 CC2D1AQ6P1N0 951 aaPredicted RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 TOGARAM2Q6ZUX3 1019 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 SCML4Q8N228 414 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 TRIM7Q9C029 511 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 HPS4Q9NQG7 708 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 MYO1AQ9UBC5 1043 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
APTX-213ENST00000465003 SH3BP1Q9Y3L3 701 aa12.4□□□□□ -0.42
APTX-213ENST00000465003 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms