RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
APP-213ENST00000464867 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
APP-213ENST00000464867 SNX11Q9Y5W9 270 aa10.06□□□□□ -0.8
APP-213ENST00000464867 METTL12A8MUP2 240 aa10.05□□□□□ -0.8
APP-213ENST00000464867 CYB561D2O14569 222 aa10.05□□□□□ -0.8
APP-213ENST00000464867 CLDN3O15551 220 aa10.05□□□□□ -0.8
APP-213ENST00000464867 KLK10O43240 276 aa10.05□□□□□ -0.8
APP-213ENST00000464867 TADA3O75528 432 aa10.05□□□□□ -0.8
APP-213ENST00000464867 TOM1L1O75674 476 aa10.05□□□□□ -0.8
APP-213ENST00000464867 SOX11P35716 441 aa10.05□□□□□ -0.8
APP-213ENST00000464867 GPR15P49685 360 aa10.05□□□□□ -0.8
APP-213ENST00000464867 PEX3P56589 373 aa10.05□□□□□ -0.8
APP-213ENST00000464867 ZBTB6Q15916 424 aa10.05□□□□□ -0.8
APP-213ENST00000464867 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
APP-213ENST00000464867 SDHAF4Q5VUM1 108 aa10.05□□□□□ -0.8
APP-213ENST00000464867 CPLX2Q6PUV4 134 aaKnown RBP10.05□□□□□ -0.8
APP-213ENST00000464867 DDX42Q86XP3 938 aaKnown RBP eCLIP10.05□□□□□ -0.8
APP-213ENST00000464867 CATSPER3Q86XQ3 398 aa10.05□□□□□ -0.8
APP-213ENST00000464867 DHX40Q8IX18 779 aaKnown RBP10.05□□□□□ -0.8
APP-213ENST00000464867 LSMEM2Q8N112 164 aa10.05□□□□□ -0.8
APP-213ENST00000464867 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
APP-213ENST00000464867 ERMNQ8TAM6 284 aa10.05□□□□□ -0.8
APP-213ENST00000464867 KCNE4Q8WWG9 221 aa10.05□□□□□ -0.8
APP-213ENST00000464867 SNX19Q92543 992 aa10.05□□□□□ -0.8
APP-213ENST00000464867 CNDP2Q96KP4 475 aaKnown RBP10.05□□□□□ -0.8
APP-213ENST00000464867 PYM1Q9BRP8 204 aaKnown RBP10.05□□□□□ -0.8
APP-213ENST00000464867 DPH1Q9BZG8 443 aa10.05□□□□□ -0.8
APP-213ENST00000464867 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
APP-213ENST00000464867 KMT5AQ9NQR1 393 aa10.05□□□□□ -0.8
APP-213ENST00000464867 WSB2Q9NYS7 404 aaPredicted RBP10.05□□□□□ -0.8
APP-213ENST00000464867 KCNJ14Q9UNX9 436 aa10.05□□□□□ -0.8
APP-213ENST00000464867 ANKRD6Q9Y2G4 727 aa10.05□□□□□ -0.8
APP-213ENST00000464867 STARD13Q9Y3M8 1113 aa10.05□□□□□ -0.8
APP-213ENST00000464867 TTC26A0AVF1 554 aa10.04□□□□□ -0.8
APP-213ENST00000464867 TULP3O75386 442 aa10.04□□□□□ -0.8
APP-213ENST00000464867 AFPP02771 609 aaKnown RBP10.04□□□□□ -0.8
APP-213ENST00000464867 SPATA31C1P0DKV0 1188 aa10.04□□□□□ -0.8
APP-213ENST00000464867 KRT10P13645 584 aa10.04□□□□□ -0.8
APP-213ENST00000464867 GLDCP23378 1020 aa10.04□□□□□ -0.8
APP-213ENST00000464867 CCR10P46092 362 aa10.04□□□□□ -0.8
APP-213ENST00000464867 NPTX2P47972 431 aa10.04□□□□□ -0.8
APP-213ENST00000464867 GUCY2FP51841 1108 aa10.04□□□□□ -0.8
APP-213ENST00000464867 CLDN6P56747 220 aa10.04□□□□□ -0.8
APP-213ENST00000464867 STARD3Q14849 445 aa10.04□□□□□ -0.8
APP-213ENST00000464867 NPY5RQ15761 445 aa10.04□□□□□ -0.8
APP-213ENST00000464867 KYAT1Q16773 422 aa10.04□□□□□ -0.8
APP-213ENST00000464867 LY6G5CQ5SRR4 150 aa10.04□□□□□ -0.8
APP-213ENST00000464867 ADAT2Q7Z6V5 191 aaKnown RBP10.04□□□□□ -0.8
APP-213ENST00000464867 TERB1Q8NA31 727 aa10.04□□□□□ -0.8
APP-213ENST00000464867 SNRNP27Q8WVK2 155 aaKnown RBP10.04□□□□□ -0.8
APP-213ENST00000464867 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
APP-213ENST00000464867 ZBTB45Q96K62 511 aaPredicted RBP10.04□□□□□ -0.8
APP-213ENST00000464867 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
APP-213ENST00000464867 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
APP-213ENST00000464867 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
APP-213ENST00000464867 CD93Q9NPY3 652 aa10.04□□□□□ -0.8
APP-213ENST00000464867 ITM2CQ9NQX7 267 aa10.04□□□□□ -0.8
APP-213ENST00000464867 EHD2Q9NZN4 543 aa10.04□□□□□ -0.8
APP-213ENST00000464867 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
APP-213ENST00000464867 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
APP-213ENST00000464867 CLCA2Q9UQC9 943 aa10.04□□□□□ -0.8
APP-213ENST00000464867 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
APP-213ENST00000464867 LACTBL1A8MY62 500 aa10.03□□□□□ -0.8
APP-213ENST00000464867 TMEM229AB2RXF0 380 aa10.03□□□□□ -0.8
APP-213ENST00000464867 KCNK3O14649 394 aa10.03□□□□□ -0.8
APP-213ENST00000464867 ACADMP11310 421 aa10.03□□□□□ -0.8
APP-213ENST00000464867 MYF5P13349 255 aa10.03□□□□□ -0.8
APP-213ENST00000464867 ABCB4P21439 1286 aa10.03□□□□□ -0.8
APP-213ENST00000464867 CYP2F1P24903 491 aa10.03□□□□□ -0.8
APP-213ENST00000464867 MYL7Q01449 175 aa10.03□□□□□ -0.8
APP-213ENST00000464867 ILKQ13418 452 aa10.03□□□□□ -0.8
APP-213ENST00000464867 SAFBQ15424 915 aaKnown RBP eCLIP10.03□□□□□ -0.8
APP-213ENST00000464867 ANO4Q32M45 955 aa10.03□□□□□ -0.8
APP-213ENST00000464867 SPATA1Q5VX52 437 aa10.03□□□□□ -0.8
APP-213ENST00000464867 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
APP-213ENST00000464867 EGFLAMQ63HQ2 1017 aa10.03□□□□□ -0.8
APP-213ENST00000464867 GRAMD4Q6IC98 578 aa10.03□□□□□ -0.8
APP-213ENST00000464867 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
APP-213ENST00000464867 SCN4BQ8IWT1 228 aa10.03□□□□□ -0.8
APP-213ENST00000464867 CACTIN-AS1Q8N1I8 211 aa10.03□□□□□ -0.8
APP-213ENST00000464867 TMEM130Q8N3G9 435 aa10.03□□□□□ -0.8
APP-213ENST00000464867 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
APP-213ENST00000464867 SCARF2Q96GP6 870 aaPredicted RBP10.03□□□□□ -0.8
APP-213ENST00000464867 GABRG3Q99928 467 aa10.03□□□□□ -0.8
APP-213ENST00000464867 PCED1AQ9H1Q7 454 aa10.03□□□□□ -0.8
APP-213ENST00000464867 SLC6A17Q9H1V8 727 aa10.03□□□□□ -0.8
APP-213ENST00000464867 ALG2Q9H553 416 aa10.03□□□□□ -0.8
APP-213ENST00000464867 CFAP97Q9P2B7 532 aa10.03□□□□□ -0.8
APP-213ENST00000464867 KCNG1Q9UIX4 513 aa10.03□□□□□ -0.8
APP-213ENST00000464867 RAD54BQ9Y620 910 aa10.03□□□□□ -0.8
APP-213ENST00000464867 CPQQ9Y646 472 aa10.03□□□□□ -0.8
APP-213ENST00000464867 ANO9A1A5B4 782 aa10.02□□□□□ -0.81
APP-213ENST00000464867 H0Y8X5 98 aa10.02□□□□□ -0.81
APP-213ENST00000464867 GFRA2O00451 464 aa10.02□□□□□ -0.81
APP-213ENST00000464867 ABLIM1O14639 778 aa10.02□□□□□ -0.81
APP-213ENST00000464867 SCAMP3O14828 347 aaKnown RBP10.02□□□□□ -0.81
APP-213ENST00000464867 PPEF2O14830 753 aa10.02□□□□□ -0.81
APP-213ENST00000464867 NEMFO60524 1076 aa10.02□□□□□ -0.81
APP-213ENST00000464867 MED24O75448 989 aa10.02□□□□□ -0.81
APP-213ENST00000464867 KRT38O76015 456 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms