RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, human

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-205	ENST00000464480	KRT27	Q7Z3Y8	459 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	ZNF804A	Q7Z570	1209 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	ABHD11	Q8NFV4	315 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	THAP4	Q8WY91	577 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	OVCA2	Q8WZ82	227 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	WDYHV1	Q96HA8	205 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	TTPAL	Q9BTX7	342 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	KIF17	Q9P2E2	1029 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	SRP68	Q9UHB9	627 aa	Known RBP	4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	AMFR	Q9UKV5	643 aa		4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.23	□□□□□ -1.73
HMGXB4-205	ENST00000464480	GRID2IP	A4D2P6	1211 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	LINC00473	A8K010	186 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	EFCAB8	A8MWE9	144 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480		H0YIZ8	118 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	AP4M1	O00189	453 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MATN3	O15232	486 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	SPRY2	O43597	315 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	RPP40	O75818	363 aa	Known RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	ENG	P17813	658 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MMP8	P22894	467 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	CYP2C18	P33260	490 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MPL	P40238	635 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MAPK9	P45984	424 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	EEFSEC	P57772	596 aa	Known RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	BFSP2	Q13515	415 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	KCNJ12	Q14500	433 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	RPS6KA2	Q15349	733 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	TAF5	Q15542	800 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	TBC1D25	Q3MII6	688 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	AASDH	Q4L235	1098 aa	Predicted RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	LCE5A	Q5TCM9	118 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	HECTD2	Q5U5R9	776 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	CCDC144NL	Q6NUI1	221 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MSANTD2	Q6P1R3	559 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	CRIP3	Q6Q6R5	217 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	PIK3AP1	Q6ZUJ8	805 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	TRABD2A	Q86V40	505 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	BEND2	Q8NDZ0	799 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	OR1N1	Q8NGS0	311 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	SPPL3	Q8TCT6	385 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	CPT1B	Q92523	772 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	C3orf49	Q96BT1	292 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	PRRX2	Q99811	253 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	PAAF1	Q9BRP4	392 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	DDX23	Q9BUQ8	820 aa	Known RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	FSD1L	Q9BXM9	530 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	BRD8	Q9H0E9	1235 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	ELAC1	Q9H777	363 aa	Known RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	MLXIP	Q9HAP2	919 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	DUSP22	Q9NRW4	184 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	RXFP3	Q9NSD7	469 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	SERTAD4	Q9NUC0	356 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	FBXO28	Q9NVF7	368 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	NDUFAF4	Q9P032	175 aa		4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.22	□□□□□ -1.73
HMGXB4-205	ENST00000464480	GXYLT2	A0PJZ3	443 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	CTIF	O43310	598 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	PPP6R2	O75170	966 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	LARGE1	O95461	756 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	MYCL	P12524	364 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	ZNF37A	P17032	561 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	MCM5	P33992	734 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	ADRA1B	P35368	520 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	CCT8	P50990	548 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	PAPOLA	P51003	745 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	PNLIPRP1	P54315	467 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	POU5F1B	Q06416	359 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	SEMA3B	Q13214	749 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	CBFB	Q13951	182 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	TAF12	Q16514	161 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	FAM153C	Q494X1	144 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	ALF	Q53S48	1182 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	AARS2	Q5JTZ9	985 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	L1TD1	Q5T7N2	865 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	TTC22	Q5TAA0	569 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	FAM90A2P	Q658T7	463 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	C2CD5	Q86YS7	1000 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	VRK3	Q8IV63	474 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	ULK2	Q8IYT8	1036 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	PNPLA1	Q8N8W4	532 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	OR6Y1	Q8NGX8	325 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	SCAMP5	Q8TAC9	235 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	SLC22A17	Q8WUG5	538 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	HMGB4	Q8WW32	186 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	CTHRC1	Q96CG8	243 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	REXO5	Q96IC2	774 aa	Known RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	FAR2	Q96K12	515 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	TRAPPC9	Q96Q05	1148 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	CINP	Q9BW66	212 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	ITM2C	Q9NQX7	267 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	DLL3	Q9NYJ7	618 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	MGAT4C	Q9UBM8	478 aa		4.21	□□□□□ -1.74
HMGXB4-205	ENST00000464480	DAPP1	Q9UN19	280 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms