RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PRR23AA6NEV1 266 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 C2orf71A6NGG8 1288 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LRRC53A6NM62 1247 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 A8MXQ7 604 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 B2RBV5 119 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 E7EWF7 191 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EML1O00423 815 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NDUFS2O75306 463 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MTA2O94776 668 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 UFL1O94874 794 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TNFAIP8O95379 198 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PLEKHA8P1O95397 391 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EIF2S1P05198 315 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GRK2P25098 689 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 RPA1P27694 616 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 DNM2P50570 870 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PMS1P54277 932 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 COPZ1P61923 177 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 POU6F2P78424 691 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF200P98182 395 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KDSRQ06136 332 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 BNIP3Q12983 259 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NFE2Q16621 373 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 INSCQ1MX18 579 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PROSER3Q2NL68 480 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MEI1Q5TIA1 1274 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF787Q6DD87 383 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TPTE2Q6XPS3 522 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 DHDDSQ86SQ9 333 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TMPRSS6Q8IU80 811 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TICAM1Q8IUC6 712 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SNX29P2Q8IUI4 249 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LSMEM2Q8N112 164 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PCYOX1LQ8NBM8 494 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CHPT1Q8WUD6 406 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KRT35Q92764 455 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MTBPQ96DY7 904 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MRRFQ96E11 262 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GIMAP5Q96F15 307 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF274Q96GC6 653 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NSL1Q96IY1 281 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MTMR9Q96QG7 549 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NOC4LQ9BVI4 516 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PACSIN1Q9BY11 444 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 MRPL40Q9NQ50 206 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 WASH6PQ9NQA3 447 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SLC35C2Q9NQQ7 365 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TAS2R1Q9NYW7 299 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 HEY2Q9UBP5 337 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 FBXO2Q9UK22 296 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 VANGL2Q9ULK5 521 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SIK3Q9Y2K2 1263 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ST14Q9Y5Y6 855 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EP400Q96L91 3159 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GOLGA8QA0A0J9YX86 632 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 FAM237AA0A1B0GTK4 181 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 A0A1W2PQC6 194 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TYW5A2RUC4 315 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GOLGA8OA6NCC3 632 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PABPN1LA6NDY0 278 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LRRIQ4A6NIV6 560 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LRRC72A6NJI9 287 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 FAM25EA8MYX2 175 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 BTBD18B2RXH4 712 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GOLGA8NF8WBI6 632 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 H3BM21 787 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GOLGA8RI6L899 631 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PSMD12O00232 456 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 TRAFD1O14545 582 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GIPC1O14908 333 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EPHB6O15197 1021 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EPN2O95208 641 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZWINTO95229 277 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CELF2O95319 508 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ENO1P06733 434 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NAGAP17050 411 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 RFC4P35249 363 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF76P36508 570 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 STAT3P40763 770 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EPS15P42566 896 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 HAAOP46952 286 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SLC9A3P48764 834 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CDK9P50750 372 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 NR1H2P55055 460 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 GNG2P59768 71 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 OTUD4Q01804 1114 aaKnown RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KLHL30Q0D2K2 578 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 IKQ13123 557 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 SELENBP1Q13228 472 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 DNASE1L3Q13609 305 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 EPHA7Q15375 998 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 OCLNQ16625 522 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF829Q3KNS6 432 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PPP6R3Q5H9R7 873 aaPredicted RBP3.73□□□□□ -1.81
COL8A1-205ENST00000463753 KIAA1755Q5JYT7 1200 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 RABGAP1LQ5R372 815 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 PPM1LQ5SGD2 360 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LDLRAP1Q5SW96 308 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 CLVS2Q5SYC1 327 aa3.73□□□□□ -1.81
COL8A1-205ENST00000463753 LDLRAD1Q5T700 205 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms