RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 C10orf120Q5SQS8 335 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 EMC10Q5UCC4 262 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 PM20D1Q6GTS8 502 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 TRMT11Q7Z4G4 463 aaKnown RBP21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 TTC30AQ86WT1 665 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 TXNDC5Q8NBS9 432 aaKnown RBP21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 MDGA1Q8NFP4 955 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 KIAA1257Q9ULG3 409 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 ZNF510Q9Y2H8 683 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 TBC1D3BA6NDS4 549 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 P4HA2O15460 535 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 STC2O76061 302 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 BMP6P22004 513 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 TIE1P35590 1138 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 FMO5P49326 533 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 SLC8A3P57103 927 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 COG7P83436 770 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 ANO4Q32M45 955 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 PMS2CLQ68D20 193 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 ANO7Q6IWH7 933 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 TTI2Q6NXR4 508 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 XPO6Q96QU8 1125 aaKnown RBP21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 POLMQ9NP87 494 aaPredicted RBP21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 VPS45Q9NRW7 570 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 FBXO10Q9UK96 956 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 HCN2Q9UL51 889 aa21.59■■□□□ 1.05
PDLIM4-205ENST00000463615 PPP1R3GB7ZBB8 358 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 XPO1O14980 1071 aaKnown RBP21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 DCLK1O15075 740 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 MDM4O15151 490 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 MPLP40238 635 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 BCAT1P54687 386 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 MORC3Q14149 939 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 SGO2Q562F6 1265 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 GRAMD4Q6IC98 578 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 NAT16Q8N8M0 369 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 BBS2Q9BXC9 721 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 NUDT5Q9UKK9 219 aa21.58■■□□□ 1.05
PDLIM4-205ENST00000463615 MYO18AQ92614 2054 aaKnown RBP21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 SPTBN2O15020 2390 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 BCLAF3A2AJT9 711 aaKnown RBP21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 GDF9O60383 454 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 VDRP11473 427 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 TYRP14679 529 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 PKDCCQ504Y2 493 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 BHLHA9Q7RTU4 235 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 SCML4Q8N228 414 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 TPSD1Q9BZJ3 242 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 DCLK3Q9C098 648 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 TSPAN16Q9UKR8 245 aa21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 CIZ1Q9ULV3 898 aaPredicted RBP21.57■■□□□ 1.04
PDLIM4-205ENST00000463615 BICDL2A1A5D9 508 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 NEDD8-MDP1E9PL57 170 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 O00370 1275 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 ZBED1O96006 694 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 PENKP01210 267 aaPredicted RBP21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 KLKB1P03952 638 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 PAEPP09466 180 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 CISD3P0C7P0 127 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 P2RY2P41231 377 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 TKTL1P51854 596 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 MARSP56192 900 aaKnown RBP21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 PDE4CQ08493 712 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 BST2Q10589 180 aaKnown RBP21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 GOLGA7BQ2TAP0 167 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 C10orf76Q5T2E6 689 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 ZNF513Q8N8E2 541 aaPredicted RBP21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 LMO3Q8TAP4 145 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 KCTD13Q8WZ19 329 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 DNAJC17Q9NVM6 304 aaKnown RBP21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 HESX1Q9UBX0 185 aa21.56■■□□□ 1.04
PDLIM4-205ENST00000463615 DCDC2BA2VCK2 349 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 TM4SF5O14894 197 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 TRIM24O15164 1050 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 SETSIPP0DME0 302 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 CHKAP35790 457 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 YWHAGP61981 247 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 SF3A2Q15428 464 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 SPDYCQ5MJ68 293 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 LCLAT1Q6UWP7 414 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 MIB1Q86YT6 1006 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 C12orf50Q8NA57 414 aaPredicted RBP21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 DDX1Q92499 740 aaKnown RBP21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 NT5C1BQ96P26 610 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 CD248Q9HCU0 757 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 SLC27A6Q9Y2P4 619 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 ABCA7Q8IZY2 2146 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 PLXND1Q9Y4D7 1925 aa21.55■■□□□ 1.04
PDLIM4-205ENST00000463615 TULP2O00295 520 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 GNA14O95837 355 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 NTSR1P30989 418 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 CETN1Q12798 172 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 EFEMP1Q12805 493 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 BYSLQ13895 437 aaKnown RBP21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 CCDC40Q4G0X9 1142 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 AASDHQ4L235 1098 aaPredicted RBP21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 ISM2Q6H9L7 571 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 TPGS1Q6ZTW0 290 aa21.54■■□□□ 1.04
PDLIM4-205ENST00000463615 TRIM59Q8IWR1 403 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms