RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 UBL7Q96S82 380 aaPredicted RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 PKMYT1Q99640 499 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 HSD3B7Q9H2F3 369 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 POLMQ9NP87 494 aaPredicted RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 UXTQ9UBK9 157 aaPredicted RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 PCOLCE2Q9UKZ9 415 aa11.83□□□□□ -0.52
SSR3-202ENST00000463503 COL5A1P20908 1838 aaPredicted RBP11.83□□□□□ -0.52
SSR3-202ENST00000463503 A0A0A0MRY4 1105 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 LRRC10BA6NIK2 292 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 SYPP08247 313 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 KRT13P13646 458 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 GABRG2P18507 467 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 CYP2F1P24903 491 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 GTF2H1P32780 548 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 EIF2DP41214 584 aaKnown RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 TAF6P49848 677 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 BYSLQ13895 437 aaKnown RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 NUMA1Q14980 2115 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 TMEM132DQ14C87 1099 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 EOGTQ5NDL2 527 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 MARCH9Q86YJ5 346 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 TRIM59Q8IWR1 403 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 SCUBE3Q8IX30 993 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 THEM5Q8N1Q8 247 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 AOPEPQ8N6M6 819 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 SPATA18Q8TC71 538 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 ABCB6Q9NP58 842 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 KIAA1522Q9P206 1035 aaPredicted RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
SSR3-202ENST00000463503 APOBEC2Q9Y235 224 aaKnown RBP11.82□□□□□ -0.52
SSR3-202ENST00000463503 BOD1L1Q8NFC6 3051 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 BECN2A8MW95 431 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 TK2O00142 265 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 LEFTY2O00292 366 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 STX10O60499 249 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 VAMP7P51809 220 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 KDSRQ06136 332 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 GRIK2Q13002 908 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 DHCR24Q15392 516 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 NFE2Q16621 373 aaPredicted RBP11.81□□□□□ -0.52
SSR3-202ENST00000463503 SLC36A4Q6YBV0 504 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 DCP1BQ8IZD4 617 aaKnown RBP11.81□□□□□ -0.52
SSR3-202ENST00000463503 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 PLEKHO2Q8TD55 490 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
SSR3-202ENST00000463503 HSPA12BQ96MM6 686 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 PNKPQ96T60 521 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 CGRRF1Q99675 332 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 CD93Q9NPY3 652 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 SAMSN1Q9NSI8 373 aaKnown RBP11.81□□□□□ -0.52
SSR3-202ENST00000463503 FANCLQ9NW38 375 aa11.81□□□□□ -0.52
SSR3-202ENST00000463503 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
SSR3-202ENST00000463503 PLXNA2O75051 1894 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 A0A1W2PQF6 199 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 LRRIQ3A6PVS8 624 aaPredicted RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 SCAMP3O14828 347 aaKnown RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 P4HA2O15460 535 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 OLFM2O95897 454 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 APODP05090 189 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 WNT7BP56706 349 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 RPL10AP62906 217 aaKnown RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 TPM4P67936 248 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 TSPY1Q01534 308 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 PLEKHG6Q3KR16 790 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 CFAP221Q4G0U5 840 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 INTS6LQ5JSJ4 861 aaKnown RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 C1orf220Q5T0J3 134 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 MIB1Q86YT6 1006 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 SLC35C1Q96A29 364 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 PDE11AQ9HCR9 933 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 ARHGEF4Q9NR80 690 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 LIMA1Q9UHB6 759 aaKnown RBP11.8□□□□□ -0.52
SSR3-202ENST00000463503 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
SSR3-202ENST00000463503 PIEZO2Q9H5I5 2752 aa11.79□□□□□ -0.52
SSR3-202ENST00000463503 GTPBP10A4D1E9 387 aaKnown RBP11.79□□□□□ -0.52
SSR3-202ENST00000463503 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
SSR3-202ENST00000463503 KCNJ18B7U540 433 aa11.79□□□□□ -0.52
SSR3-202ENST00000463503 HDCP19113 662 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms