RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 DEFB119Q8N690 84 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 MMS19Q96T76 1030 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
PLOD3-210ENST00000463479 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 PILRBQ9UKJ0 227 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 PI4KAP42356 2102 aa13.67□□□□□ -0.22
PLOD3-210ENST00000463479 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 UPK3BL1B0FP48 263 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 UPK3BL2E5RIL1 263 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 PHACTR2O75167 634 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 TNFRSF4P43489 277 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 IFRD2Q12894 506 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 KCNJ12Q14500 433 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 DUOXA2Q1HG44 320 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 PEAR1Q5VY43 1037 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 SLITRK1Q96PX8 696 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
PLOD3-210ENST00000463479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
PLOD3-210ENST00000463479 PKD1L2Q7Z442 2459 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 AP5Z1O43299 807 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 COCHO43405 550 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 GABRG2P18507 467 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 HOXD12P35452 270 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 DPP6P42658 865 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 AP3M2P53677 418 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 FAM193AP78312 1265 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 RPL6Q02878 288 aaKnown RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 BIRC3Q13489 604 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 ACAP1Q15027 740 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 ETFBKMTQ8IXQ9 262 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 HDDC3Q8N4P3 179 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 CHCHD4Q8N4Q1 142 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 OR2I1PQ8NGU4 316 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 OR6B3Q8NGW1 331 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
PLOD3-210ENST00000463479 MED15Q96RN5 788 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 CGRRF1Q99675 332 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 ZNF518BQ9C0D4 1074 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 SNX25Q9H3E2 840 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
PLOD3-210ENST00000463479 CEP192Q8TEP8 1941 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 MYO18AQ92614 2054 aaKnown RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 E2F8A0AVK6 867 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 CLDN5O00501 218 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TACC1O75410 805 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 SERPINF2P08697 491 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 PTPN1P18031 435 aaKnown RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 WASP42768 502 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 GAD2Q05329 585 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 ENPEPQ07075 957 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 CETN1Q12798 172 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TRPC3Q13507 836 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 TRAPPC11Q7Z392 1133 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 MINDY1Q8N5J2 469 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 ZNF513Q8N8E2 541 aaPredicted RBP13.64□□□□□ -0.23
PLOD3-210ENST00000463479 CEP76Q8TAP6 659 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 B3GNT5Q9BYG0 378 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 ELOVL4Q9GZR5 314 aa13.64□□□□□ -0.23
PLOD3-210ENST00000463479 CALCOCO1Q9P1Z2 691 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms