RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ANAPC5Q9UJX4 755 aa10.35□□□□□ -0.75
PTPRD-207ENST00000463477 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
PTPRD-207ENST00000463477 SIGLEC16A6NMB1 481 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 LACTBL1A8MY62 500 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 LINC01565O15544 149 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 LIASO43766 372 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 B3GAT3O94766 335 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 FSBPO95073 299 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 BRD2P25440 801 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ADCY8P40145 1251 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CLCNKBP51801 687 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 RPL7AP62424 266 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TFAMQ00059 246 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 DLX2Q07687 328 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ELAVL2Q12926 359 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ACAP1Q15027 740 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TAZQ16635 292 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 C2CD6Q53TS8 623 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ZNF667Q5HYK9 610 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 HIBCHQ6NVY1 386 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 DCUN1D2Q6PH85 259 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 SPOCD1Q6ZMY3 1216 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ERICH1Q86X53 443 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 MSLNLQ96KJ4 702 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CCDC114Q96M63 670 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ZNF317Q96PQ6 595 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 HERC2P3Q9BVR0 1158 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 RXFP1Q9HBX9 757 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 PPANQ9NQ55 473 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CLEC1BQ9P126 229 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CACNG4Q9UBN1 327 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ACTL7BQ9Y614 415 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 SF3B1O75533 1304 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 hCG_1818297A0A087WSY0 165 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 O00370 1275 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 DNALI1O14645 258 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 XPOTO43592 962 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CLASP2O75122 1294 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 GLP2RO95838 553 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 C1RP00736 705 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 URODP06132 367 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ITGAVP06756 1048 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 KRT7P08729 469 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CHN1P15882 459 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 DRD4P21917 467 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 GLUD2P49448 558 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ZNF268Q14587 947 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 STAT4Q14765 748 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 KIAA1841Q6NSI8 718 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 EP400NLQ6ZTU2 488 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ZCCHC9Q8N567 271 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 ALLCQ8N6M5 410 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 CXorf38Q8TB03 319 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 EPS8L3Q8TE67 593 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 AUTS2Q8WXX7 1259 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TFAP2BQ92481 460 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TTC25Q96NG3 672 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 MCEEQ96PE7 176 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 KLHL5Q96PQ7 755 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 EMILIN2Q9BXX0 1053 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 PPCSQ9HAB8 311 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 FNIP2Q9P278 1114 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 UBQLN1Q9UMX0 589 aaKnown RBP10.34□□□□□ -0.75
PTPRD-207ENST00000463477 DERAQ9Y315 318 aa10.34□□□□□ -0.75
PTPRD-207ENST00000463477 TLDC2A0PJX2 215 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 GRXCR2A6NFK2 248 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 H3BQ06 376 aaPredicted RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 TBX10O75333 385 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 KRT1P04264 644 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CNPP09543 421 aaKnown RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 P4HA1P13674 534 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 HOXB8P17481 243 aaPredicted RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CD58P19256 250 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 LRPAP1P30533 357 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CHKAP35790 457 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CDKN2BP42772 138 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 GABRB2P47870 512 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 NDUFV1P49821 464 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 VCPP55072 806 aaKnown RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 OGDHQ02218 1023 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 OASLQ15646 514 aaKnown RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 GKAP1Q5VSY0 366 aaPredicted RBP10.33□□□□□ -0.76
PTPRD-207ENST00000463477 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 IZUMO3Q5VZ72 239 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 SCARA3Q6AZY7 606 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 ANKS1BQ7Z6G8 1248 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 PHLDB2Q86SQ0 1253 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 CCDC25Q86WR0 208 aa10.33□□□□□ -0.76
PTPRD-207ENST00000463477 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms