RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 ZIM3Q96PE6 472 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 MRPL1Q9BYD6 325 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 SNX5Q9Y5X3 404 aa13.22□□□□□ -0.29
NUP58-206ENST00000463407 MORC2Q9Y6X9 1032 aaPredicted RBP13.22□□□□□ -0.29
NUP58-206ENST00000463407 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 IFRD1O00458 451 aaPredicted RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 GRK3P35626 688 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 YWHAZP63104 245 aaKnown RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 PABPC1LQ4VXU2 614 aaKnown RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 GLP2RO95838 553 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 SOX11P35716 441 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 HDAC4P56524 1084 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 NCALDP61601 193 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 EFL1Q7Z2Z2 1120 aaKnown RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 KIAA0319LQ8IZA0 1049 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 DCLK3Q9C098 648 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 STOML1Q9UBI4 398 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 DRG1Q9Y295 367 aaKnown RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■■■■■ 34.1
NUP58-206ENST00000463407 TMEM120BA0PK00 339 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 BTBD19C9JJ37 291 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 NOA1Q8NC60 698 aaKnown RBP13.21□□□□□ -0.29
NUP58-206ENST00000463407 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 OSGEPQ9NPF4 335 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 NMRK1Q9NWW6 199 aa13.21□□□□□ -0.29
NUP58-206ENST00000463407 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 PPP1R37O75864 691 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 MAPK7Q13164 816 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 SLC29A2Q14542 456 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 CHI3L2Q15782 390 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 WSCD1Q658N2 575 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 MAP4K3Q8IVH8 894 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 VPS37AQ8NEZ2 397 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 ZNF473Q8WTR7 871 aaKnown RBP13.21□□□□□ -0.3
NUP58-206ENST00000463407 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 CAND2O75155 1236 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 PROSCO94903 275 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 FGFR1P11362 822 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 CDKAL1Q5VV42 579 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 RBM23Q86U06 439 aaKnown RBP13.21□□□□□ -0.3
NUP58-206ENST00000463407 FBXO36Q8NEA4 188 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 FAM162AQ96A26 154 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 MANSC1Q9H8J5 431 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 DTNAQ9Y4J8 743 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 HES2Q9Y543 173 aa13.21□□□□□ -0.3
NUP58-206ENST00000463407 GTPBP10A4D1E9 387 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 FKBP9O95302 570 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 IGSF6O95976 241 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 GRK4P32298 578 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 FKBP9P1Q75LS8 142 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 PLPPR4Q7Z2D5 763 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ZNF438Q7Z4V0 828 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ICA1LQ8NDH6 482 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 CCDC3Q9BQI4 270 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 CFAP73A6NFT4 308 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 MYO1GB0I1T2 1018 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 GLRA2P23416 452 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 LRRC40Q9H9A6 602 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 HPS4Q9NQG7 708 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 NUDT5Q9UKK9 219 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 PCNAP12004 261 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 EIF4BP23588 611 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 NDUFV1P49821 464 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 KCNK10P57789 538 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 INPP5AQ14642 412 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 NFIL3Q16649 462 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 RFX3P48380 749 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 PTAR1Q7Z6K3 402 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 NCAM2O15394 837 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 PLA2G6O60733 806 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 NDUFS2O75306 463 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 MAFO75444 373 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 PTPN1P18031 435 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 CRYBB1P53674 252 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 ZNF268Q14587 947 aaPredicted RBP13.2□□□□□ -0.3
NUP58-206ENST00000463407 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 SUSD6Q92537 303 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 JADE3Q92613 823 aa13.2□□□□□ -0.3
NUP58-206ENST00000463407 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms