RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 GKN1Q9NS71 199 aa18.59■□□□□ 0.57
SF1-212ENST00000463343 CLIC5Q9NZA1 410 aa18.59■□□□□ 0.57
SF1-212ENST00000463343 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
SF1-212ENST00000463343 NUDT5Q9UKK9 219 aa18.59■□□□□ 0.57
SF1-212ENST00000463343 CPQQ9Y646 472 aa18.59■□□□□ 0.57
SF1-212ENST00000463343 TPRP12270 2363 aaKnown RBP18.58■□□□□ 0.56
SF1-212ENST00000463343 YJEFN3A6XGL0 299 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 PRR5-ARHGAP8B1AHC4 643 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 E7ENQ6 273 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 LEFTY2O00292 366 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 ARNTLO00327 626 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 NRLP54845 237 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 DAOAP59103 153 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 YWHAGP61981 247 aaKnown RBP eCLIP18.58■□□□□ 0.56
SF1-212ENST00000463343 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 ARHGAP29Q52LW3 1261 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 TMEM110Q86TL2 294 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 NOP9Q86U38 636 aaKnown RBP18.58■□□□□ 0.56
SF1-212ENST00000463343 PASD1Q8IV76 773 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 SCUBE3Q8IX30 993 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 SIX6OS1Q8N1H7 587 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 ARHGAP18Q8N392 663 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 ZFRQ96KR1 1074 aaKnown RBP18.58■□□□□ 0.56
SF1-212ENST00000463343 ST7Q9NRC1 585 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 THG1LQ9NWX6 298 aaKnown RBP18.58■□□□□ 0.56
SF1-212ENST00000463343 SMPD4Q9NXE4 827 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 IFNKQ9P0W0 207 aa18.58■□□□□ 0.56
SF1-212ENST00000463343 NUP210Q8TEM1 1887 aaPredicted RBP18.58■□□□□ 0.56
SF1-212ENST00000463343 RALAP11233 206 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 ATP5C1P36542 298 aaKnown RBP18.57■□□□□ 0.56
SF1-212ENST00000463343 PBX1P40424 430 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 USP4Q13107 963 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 PPP2R5DQ14738 602 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 TAF3Q5VWG9 929 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 BSPRYQ5W0U4 402 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 CACNA2D4Q7Z3S7 1137 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 TTC16Q8NEE8 873 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 EPS8L1Q8TE68 723 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 CLEC4CQ8WTT0 213 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 IRGQQ8WZA9 623 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 FAM83CQ9BQN1 747 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 KLF16Q9BXK1 252 aaPredicted RBP18.57■□□□□ 0.56
SF1-212ENST00000463343 MIS12Q9H081 205 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 CHRDQ9H2X0 955 aa18.57■□□□□ 0.56
SF1-212ENST00000463343 NOCTQ9UK39 431 aaKnown RBP18.57■□□□□ 0.56
SF1-212ENST00000463343 MDM4O15151 490 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 FBXO21O94952 628 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 CHRNB2P17787 502 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 ACADSBP45954 432 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 PDCLQ13371 301 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 MTF1Q14872 753 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 RSPO4Q2I0M5 234 aaPredicted RBP18.56■□□□□ 0.56
SF1-212ENST00000463343 C10orf120Q5SQS8 335 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 BTBD8Q5XKL5 378 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 KLHDC10Q6PID8 442 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 C1orf228Q6PIY5 440 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 SLC20A1Q8WUM9 679 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 BAP1Q92560 729 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 WBP2Q969T9 261 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 NACA2Q9H009 215 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 LINC00597Q9H2U6 94 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 CFAP97Q9P2B7 532 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 TJP2Q9UDY2 1190 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 DNMT3LQ9UJW3 386 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 SMG5Q9UPR3 1016 aaKnown RBP18.56■□□□□ 0.56
SF1-212ENST00000463343 COL4A3Q01955 1670 aa18.56■□□□□ 0.56
SF1-212ENST00000463343 E5RJQ4 531 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 PAPSS1O43252 624 aaPredicted RBP18.55■□□□□ 0.56
SF1-212ENST00000463343 MMEP08473 750 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 TDGF1P13385 188 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 CDH5P33151 784 aaPredicted RBP18.55■□□□□ 0.56
SF1-212ENST00000463343 PLCB2Q00722 1185 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 LMNB2Q03252 620 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 TNK2Q07912 1038 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 MTAPQ13126 283 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 TRIM68Q6AZZ1 485 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
SF1-212ENST00000463343 C1orf131Q8NDD1 294 aaKnown RBP18.55■□□□□ 0.56
SF1-212ENST00000463343 EDEM1Q92611 657 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 MSANTD3Q96H12 275 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 PPP1R13BQ96KQ4 1090 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 CPXM1Q96SM3 734 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 XPO4Q9C0E2 1151 aaKnown RBP18.55■□□□□ 0.56
SF1-212ENST00000463343 TTYH3Q9C0H2 523 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 WNT6Q9Y6F9 365 aa18.55■□□□□ 0.56
SF1-212ENST00000463343 SPTBN2O15020 2390 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 TGM1P22735 817 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 CDR2Q01850 454 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 ARID5AQ03989 594 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 EFEMP1Q12805 493 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 IRF2BP2Q7Z5L9 587 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 TADA2BQ86TJ2 420 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 ZNF677Q86XU0 584 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 TMEM35BQ8NCS4 154 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 TTC8Q8TAM2 541 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 OSCP1Q8WVF1 389 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 CDK5RAP1Q96SZ6 601 aaKnown RBP18.54■□□□□ 0.56
SF1-212ENST00000463343 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
SF1-212ENST00000463343 HPS4Q9NQG7 708 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms