RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PSMC6P62333 389 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ASIC1P78348 528 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SRSF2Q01130 221 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SREBF2Q12772 1141 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 KCNB1Q14721 858 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 TOR2AQ5JU69 321 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ARHGEF18Q6ZSZ5 1173 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SEPT14Q6ZU15 432 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 USP30Q70CQ3 517 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 FRMD5Q7Z6J6 570 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ABRAQ8N0Z2 381 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 NEK9Q8TD19 979 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 ANP32BQ92688 251 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 CCDC47Q96A33 483 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SMAD5Q99717 465 aaKnown RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 BPIFA3Q9BQP9 254 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 FDXACB1Q9BRP7 624 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 WNT8AQ9H1J5 351 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 CCM2LQ9NUG4 571 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-204ENST00000462658 RNF186Q9NXI6 227 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 DPP7Q9UHL4 492 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 CPA4Q9UI42 421 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 SLC4A7Q9Y6M7 1214 aa8.05□□□□□ -1.12
UBE4B-204ENST00000462658 NFASCO94856 1347 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 LOC102724159A0A0B4J2E5 919 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 PVALEFA0A1B0GWK0 134 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 C2orf78A6NCI8 922 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 GABRDO14764 452 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 RHOBTB3O94955 611 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 ADORA2AP29274 412 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 SFNP31947 248 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 TM4SF4P48230 202 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 SLC12A3P55017 1021 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 PPP2CBP62714 309 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 PPP2CAP67775 309 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 CDK17Q00537 523 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 SP2Q02086 613 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 PWP2Q15269 919 aaKnown RBP8.04□□□□□ -1.12
UBE4B-204ENST00000462658 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 ZNF658Q5TYW1 1059 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-204ENST00000462658 GPR142Q7Z601 462 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 PLEKHH3Q7Z736 793 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 GPBP1Q86WP2 473 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 DHX40Q8IX18 779 aaKnown RBP8.04□□□□□ -1.12
UBE4B-204ENST00000462658 AOPEPQ8N6M6 819 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 SYT2Q8N9I0 419 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-204ENST00000462658 RDM1Q8NG50 284 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 MORC4Q8TE76 937 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 SENP7Q9BQF6 1050 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 MENTQ9BUN1 341 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 GTPBP4Q9BZE4 634 aaKnown RBP8.04□□□□□ -1.12
UBE4B-204ENST00000462658 ASPSCR1Q9BZE9 553 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 OR10A2Q9H208 303 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 EXOC1Q9NV70 894 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 VWA7Q9Y334 891 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 NR2E1Q9Y466 385 aa8.04□□□□□ -1.12
UBE4B-204ENST00000462658 ADGRA2Q96PE1 1338 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 SLC15A5A6NIM6 579 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 IKBKBO14920 756 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 ARHGAP6O43182 974 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 TLR2O60603 784 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CCNE2O96020 404 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 KRT18P05783 430 aaKnown RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 MYBL2P10244 700 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 TGFB3P10600 412 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 IDEP14735 1019 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CYP11B2P19099 503 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 QARSP47897 775 aaKnown RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 TPM4P67936 248 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 MYL5Q02045 173 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CD69Q07108 199 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 NOGQ13253 232 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 GRB14Q14449 540 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 INAVAQ3KP66 663 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 ZNF568Q3ZCX4 644 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 FBLN7Q53RD9 439 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 KCNV1Q6PIU1 500 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 C17orf99Q6UX52 265 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 UNC13DQ70J99 1090 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 DPP9Q86TI2 863 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 SMAP1Q8IYB5 467 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 GIMAP8Q8ND71 665 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 OR14C36Q8NHC7 312 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 PIGOQ8TEQ8 1089 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 DNAJC19Q96DA6 116 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 LXNQ9BS40 222 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 BHMT2Q9H2M3 363 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 DNAJC28Q9NX36 388 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 DDX56Q9NY93 547 aaKnown RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 WRAP73Q9P2S5 460 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-204ENST00000462658 SLC9A2Q9UBY0 812 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 PCDHA10Q9Y5I2 948 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CDY2AQ9Y6F7 541 aa8.03□□□□□ -1.12
UBE4B-204ENST00000462658 CA12O43570 354 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 DKC1O60832 514 aaKnown RBP eCLIP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms