RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 KRT19P08727 400 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 YY1P25490 414 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 CDK18Q07002 472 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 WASHC5Q12768 1159 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 FSTL1Q12841 308 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 HIC1Q14526 733 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 RALGPS1Q5JS13 557 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 RASIP1Q5U651 963 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 PLD5Q8N7P1 536 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 RNF217Q8TC41 542 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 PRPF31Q8WWY3 499 aaKnown RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 PPP2R3CQ969Q6 453 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 PIWIL1Q96J94 861 aaKnown RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 RNF157Q96PX1 679 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 ASNSD1Q9NWL6 643 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 FKBP6O75344 327 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 MICAL2O94851 1124 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 AOC1P19801 751 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 CRHR1P34998 444 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 CDK7P50613 346 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 TFDP2Q14188 446 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 CDR2LQ86X02 465 aaPredicted RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 OR6Y1Q8NGX8 325 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 ACO2Q99798 780 aaKnown RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 SPATA16Q9BXB7 569 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 MRPL4Q9BYD3 311 aaKnown RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 NIFKQ9BYG3 293 aaKnown RBP19.11■□□□□ 0.65
HPS3-204ENST00000462030 MAD1L1Q9Y6D9 718 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 ANK1P16157 1881 aa19.11■□□□□ 0.65
HPS3-204ENST00000462030 ZBED1O96006 694 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 HMGCRP04035 888 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 SFT2D3Q587I9 215 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 FAM47CQ5HY64 1035 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 CFAP157Q5JU67 520 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 EFHC1Q5JVL4 640 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 LPCAT4Q643R3 524 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 C16orf46Q6P387 395 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 DHDDSQ86SQ9 333 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 EGFL6Q8IUX8 553 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 RAB3IL1Q8TBN0 382 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 FAM172AQ8WUF8 416 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 STK32BQ9NY57 414 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 ZNF214Q9UL59 606 aaPredicted RBP19.1■□□□□ 0.65
HPS3-204ENST00000462030 RLFQ13129 1914 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 BRWD3Q6RI45 1802 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 LCTP09848 1927 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 M0QYV0 167 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 GRAP2O75791 330 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 SRGAP2CP0DJJ0 459 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 ZNF143P52747 638 aaPredicted RBP19.1■□□□□ 0.65
HPS3-204ENST00000462030 CBLBQ13191 982 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 LIN52Q52LA3 116 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 FASTKD1Q53R41 847 aaKnown RBP19.1■□□□□ 0.65
HPS3-204ENST00000462030 ZNF534Q76KX8 674 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 PDSS2Q86YH6 399 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 USP6NLQ92738 828 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 PCYT2Q99447 389 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 KLC2Q9H0B6 622 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 THAP1Q9NVV9 213 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 DNAJC16Q9Y2G8 782 aa19.1■□□□□ 0.65
HPS3-204ENST00000462030 BIRC5O15392 142 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 LGR5O75473 907 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 PDE5AO76074 875 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 GSRP00390 522 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 IL4RP24394 825 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 EPHB1P54762 984 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 RPL10AP62906 217 aaKnown RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 KRT81Q14533 505 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 ACAP1Q15027 740 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 TARBP2Q15633 366 aaKnown RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 RABGAP1LQ5R372 815 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 DENND5BQ6ZUT9 1274 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 DPH6Q7L8W6 267 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 SESTD1Q86VW0 696 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 RASSF3Q86WH2 238 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 PQLC3Q8N755 202 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 MTMR14Q8NCE2 650 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 PPP1R14CQ8TAE6 165 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 UBA3Q8TBC4 463 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 RXFP2Q8WXD0 754 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 RTP4Q96DX8 246 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 TEPSINQ96N21 525 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 SHCBP1LQ9BZQ2 653 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 ELOVL4Q9GZR5 314 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 SLC17A6Q9P2U8 582 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 FAM159BA6NKW6 160 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 TNNC2P02585 160 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 GPD1P21695 349 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 PTPN11Q06124 597 aaPredicted RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 CUL3Q13618 768 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 HNRNPDQ14103 355 aaKnown RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 TMEM132BQ14DG7 1078 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 ZBED3Q96IU2 234 aaPredicted RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 ZNF668Q96K58 619 aaPredicted RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 SIGLEC10Q96LC7 697 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 FRMD8Q9BZ67 464 aaPredicted RBP19.09■□□□□ 0.65
HPS3-204ENST00000462030 ADAMTS6Q9UKP5 1117 aa19.09■□□□□ 0.65
HPS3-204ENST00000462030 PRKCBP05771 671 aa19.08■□□□□ 0.65
HPS3-204ENST00000462030 ETS2P15036 469 aa19.08■□□□□ 0.65
HPS3-204ENST00000462030 GABRB2P47870 512 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms