RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MARK1Q9P0L2 795 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 WDR35Q9P2L0 1181 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 TSPAN16Q9UKR8 245 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 SPTBN2O15020 2390 aa19.91■□□□□ 0.78
VARS-220ENST00000461874 NCOR2Q9Y618 2525 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 BICDL2A1A5D9 508 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 BIN1O00499 593 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 TRIM24O15164 1050 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 STC2O76061 302 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 PDE4CQ08493 712 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 USP39Q53GS9 565 aaKnown RBP19.9■□□□□ 0.78
VARS-220ENST00000461874 EOGTQ5NDL2 527 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 PM20D1Q6GTS8 502 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 TPGS1Q6ZTW0 290 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 NUDT18Q6ZVK8 323 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 MIB1Q86YT6 1006 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 TERB1Q8NA31 727 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 MDGA1Q8NFP4 955 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 NETO1Q8TDF5 533 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 KCNV2Q8TDN2 545 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 RTKNQ9BST9 563 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 BBS2Q9BXC9 721 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 KIAA1257Q9ULG3 409 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 CTNND2Q9UQB3 1225 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 PCDHGA5Q9Y5G8 931 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 KIAA1549LQ6ZVL6 1849 aa19.9■□□□□ 0.78
VARS-220ENST00000461874 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.89■□□□□ 0.77
VARS-220ENST00000461874 NEDD8-MDP1E9PL57 170 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 TULP2O00295 520 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 XPO1O14980 1071 aaKnown RBP19.89■□□□□ 0.77
VARS-220ENST00000461874 P4HA2O15460 535 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 CACNG3O60359 315 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 ADAM23O75077 832 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 VDRP11473 427 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 TYRP14679 529 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 CD19P15391 556 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 TKTL1P51854 596 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 BCAT1P54687 386 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 YWHAGP61981 247 aaKnown RBP eCLIP19.89■□□□□ 0.77
VARS-220ENST00000461874 COG7P83436 770 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 ELF2Q15723 593 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 GRAMD4Q6IC98 578 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 LMO3Q8TAP4 145 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 NT5C1BQ96P26 610 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 XPO6Q96QU8 1125 aaKnown RBP19.89■□□□□ 0.77
VARS-220ENST00000461874 TPSD1Q9BZJ3 242 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 ZDHHC4Q9NPG8 344 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 DNAJC17Q9NVM6 304 aaKnown RBP19.89■□□□□ 0.77
VARS-220ENST00000461874 HESX1Q9UBX0 185 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 RASAL2Q9UJF2 1139 aa19.89■□□□□ 0.77
VARS-220ENST00000461874 O00370 1275 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ALDH1A2O94788 518 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 RHOBTB1O94844 696 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ZBED1O96006 694 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 KLKB1P03952 638 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ZNF806P0C7X5 589 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 BST2Q10589 180 aaKnown RBP19.88■□□□□ 0.77
VARS-220ENST00000461874 CETN1Q12798 172 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 EFEMP1Q12805 493 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 CCDC6Q16204 474 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 PLA2G2CQ5R387 149 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 C10orf76Q5T2E6 689 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 C11orf74Q86VG3 221 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ZNF513Q8N8E2 541 aaPredicted RBP19.88■□□□□ 0.77
VARS-220ENST00000461874 UBA3Q8TBC4 463 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ULBP1Q9BZM6 244 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 POLMQ9NP87 494 aaPredicted RBP19.88■□□□□ 0.77
VARS-220ENST00000461874 HCN2Q9UL51 889 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 INVSQ9Y283 1065 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 ZNF510Q9Y2H8 683 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 STARD13Q9Y3M8 1113 aa19.88■□□□□ 0.77
VARS-220ENST00000461874 EML5Q05BV3 1969 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 MED19A0JLT2 244 aaPredicted RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 SLC30A4O14863 429 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 GDF9O60383 454 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 GNA14O95837 355 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 PAEPP09466 180 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 STX17P56962 302 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 PAK1Q13153 545 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 SF3A2Q15428 464 aaKnown RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 TMEM270Q6UE05 265 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 LCLAT1Q6UWP7 414 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 RSRC2Q7L4I2 434 aaKnown RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 BHLHA9Q7RTU4 235 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 TRMT11Q7Z4G4 463 aaKnown RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 OLIG1Q8TAK6 271 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 TFAP2BQ92481 460 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 NDRG1Q92597 394 aaKnown RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 DCLK3Q9C098 648 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 LRRC4Q9HBW1 653 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 MARCH2Q9P0N8 246 aa19.87■□□□□ 0.77
VARS-220ENST00000461874 MYO18AQ92614 2054 aaKnown RBP19.87■□□□□ 0.77
VARS-220ENST00000461874 DCDC2BA2VCK2 349 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 HMBSP08397 361 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 CISD3P0C7P0 127 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 SETSIPP0DME0 302 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 GBP1P32455 592 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 MPLP40238 635 aa19.86■□□□□ 0.77
VARS-220ENST00000461874 MARSP56192 900 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms