RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TYRP14679 529 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 MPLP40238 635 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 DHPSP49366 369 aaPredicted RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 DGKGP49619 791 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TKTL1P51854 596 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 ATXN1P54253 815 aaKnown RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 YWHAGP61981 247 aaKnown RBP eCLIP9.31□□□□□ -0.92
LDB1-203ENST00000461873 ZXDBP98169 803 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 BST2Q10589 180 aaKnown RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 PAK1Q13153 545 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 STARD3Q14849 445 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 STILQ15468 1287 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 C1orf220Q5T0J3 134 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 ARHGAP17Q68EM7 881 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 NAIF1Q69YI7 327 aaPredicted RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 TMEM270Q6UE05 265 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 LPCAT2Q7L5N7 544 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 CYP2U1Q7Z449 544 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 KBTBD6Q86V97 674 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 PIGZQ86VD9 579 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TMEM25Q86YD3 366 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 DDI1Q8WTU0 396 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 HMGB4Q8WW32 186 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TATDN2Q93075 761 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 BHMTQ93088 406 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
LDB1-203ENST00000461873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
LDB1-203ENST00000461873 C2orf42Q9NWW7 574 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 MARCH2Q9P0N8 246 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 NUDT5Q9UKK9 219 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 MAN1B1Q9UKM7 699 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 TSPAN16Q9UKR8 245 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
LDB1-203ENST00000461873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.31□□□□□ -0.92
LDB1-203ENST00000461873 XPO1O14980 1071 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 KHNYNO15037 678 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 P4HA2O15460 535 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 MED7O43513 233 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 SYNCRIPO60506 623 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 NDUFS2O75306 463 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 CAVIN2O95810 425 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 ZNF806P0C7X5 589 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 KRT5P13647 590 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 LCP1P13796 627 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 HOXB2P14652 356 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 NTSR1P30989 418 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 CORO1AP31146 461 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 FMO5P49326 533 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 ATXN3P54252 364 aaPredicted RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 RAD23BP54727 409 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 PLK5Q496M5 336 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 CBWD6Q4V339 395 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 CBWD3Q5JTY5 395 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 CBWD5Q5RIA9 395 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 DAB2IPQ5VWQ8 1189 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 RNF43Q68DV7 783 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 SLC36A4Q6YBV0 504 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 GPRIN1Q7Z2K8 1008 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 TRIML1Q8N9V2 468 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 TERB1Q8NA31 727 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 SLC4A11Q8NBS3 891 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 ENGASEQ8NFI3 743 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 PLD4Q96BZ4 506 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 ZC3H10Q96K80 434 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 DUSP9Q99956 384 aaKnown RBP9.3□□□□□ -0.92
LDB1-203ENST00000461873 TRIM62Q9BVG3 475 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 DLL3Q9NYJ7 618 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 INVSQ9Y283 1065 aa9.3□□□□□ -0.92
LDB1-203ENST00000461873 DCDC2BA2VCK2 349 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 HHLA1C9JL84 531 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 M0QYV0 167 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 CAPN9O14815 690 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 MDM4O15151 490 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 AP5Z1O43299 807 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 ZNF217O75362 1048 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 AFPP02771 609 aaKnown RBP9.29□□□□□ -0.92
LDB1-203ENST00000461873 PAEPP09466 180 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 STX17P56962 302 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 ZNF445P59923 1031 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 UBE2HP62256 183 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 PDE4CQ08493 712 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 ADIGQ0VDE8 80 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 CCDC6Q16204 474 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 C12orf40Q86WS4 652 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 DENND1CQ8IV53 801 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 ZNF276Q8N554 614 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 IL17RCQ8NAC3 791 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 UBA3Q8TBC4 463 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 PIGKQ92643 395 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 SLC35C1Q96A29 364 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
LDB1-203ENST00000461873 ARID3AQ99856 593 aa9.29□□□□□ -0.92
LDB1-203ENST00000461873 DDX50Q9BQ39 737 aaKnown RBP9.29□□□□□ -0.92
LDB1-203ENST00000461873 SRRTQ9BXP5 876 aaKnown RBP9.29□□□□□ -0.92
LDB1-203ENST00000461873 NUSAP1Q9BXS6 441 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms