RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ABI2Q9NYB9 513 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 GRHL1Q9NZI5 618 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 SAE1Q9UBE0 346 aaPredicted RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 DNAJB4Q9UDY4 337 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 OGDHLQ9ULD0 1010 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 DRG1Q9Y295 367 aaKnown RBP7.08□□□□□ -1.28
MSH2-204ENST00000461394 EFR3BQ9Y2G0 817 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 HEY1Q9Y5J3 304 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 NLRC5Q86WI3 1866 aa7.08□□□□□ -1.28
MSH2-204ENST00000461394 PTPRDP23468 1912 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 C3orf70A6NLC5 250 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 SMIM23A6NLE4 172 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 BHMG1C9JSJ3 638 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 H3BRJ5 948 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 APOC4-APOC2K7ER74 178 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 INPPL1O15357 1258 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CREB3O43889 395 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 GABBR2O75899 941 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZBED1O96006 694 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 APOC2P02655 101 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 LTFP02788 710 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ALDH2P05091 517 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ITGAVP06756 1048 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 OR4Q2P0C623 313 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 MYZAPP0CAP1 466 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 RBP3P10745 1247 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ETS1P14921 441 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CPB1P15086 417 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZFXP17010 805 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 TGM2P21980 687 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CYP2F1P24903 491 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ECHS1P30084 290 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CYP2C18P33260 490 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ATXN1P54253 815 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 HDAC4P56524 1084 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 DAOAP59103 153 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 FAM189BP81408 668 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 TLE2Q04725 743 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 GABPB1Q06547 395 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 ARL13BQ3SXY8 428 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 SLC25A52Q3SY17 297 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 KRT71Q3SY84 523 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ANKRD20A8PQ5CZ79 823 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 BTBD8Q5XKL5 378 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZNF280DQ6N043 979 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZDHHC24Q6UX98 284 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 NPNTQ6UXI9 565 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 LRIG3Q6UXM1 1119 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 STRADAQ7RTN6 431 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 GPRIN1Q7Z2K8 1008 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 PRUNE1Q86TP1 453 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 NPAS4Q8IUM7 802 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CDKL3Q8IVW4 592 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 ALLCQ8N6M5 410 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CCDC185Q8N715 623 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 OR10T2Q8NGX3 314 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 OR2W6PQ8NHA6 318 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 UHMK1Q8TAS1 419 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 FAM76AQ8TAV0 307 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ADAM32Q8TC27 787 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 SEC14L1Q92503 715 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 EDEM1Q92611 657 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ART4Q93070 314 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 RNF157Q96PX1 679 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 KCTD15Q96SI1 283 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 RTP3Q9BQQ7 232 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 TRIM62Q9BVG3 475 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 TSPYL1Q9H0U9 437 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ELAC1Q9H777 363 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 C10orf88Q9H8K7 445 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 PCDH18Q9HCL0 1135 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 CNGB3Q9NQW8 809 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 PRDM5Q9NQX1 630 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZDHHC18Q9NUE0 388 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 TMEM39AQ9NV64 488 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 TMLHEQ9NVH6 421 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ADAM28Q9UKQ2 775 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 NAALADL1Q9UQQ1 740 aa7.07□□□□□ -1.28
MSH2-204ENST00000461394 ZNF638Q14966 1978 aaKnown RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 FNDC1Q4ZHG4 1894 aaPredicted RBP7.07□□□□□ -1.28
MSH2-204ENST00000461394 MICAL3Q7RTP6 2002 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 SF3B1O75533 1304 aaKnown RBP eCLIP7.06□□□□□ -1.28
MSH2-204ENST00000461394 TLDC2A0PJX2 215 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 NT5C1B-RDH14C9J2C7 533 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 H7C4K7 107 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 TMEM189-UBE2V1I3L0A0 370 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 EEF2KO00418 725 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 DNALI1O14645 258 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 NRP1O14786 923 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 MDM4O15151 490 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ATP9BO43861 1147 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 B4GALT3O60512 393 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 PPFIA2O75334 1257 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 SYF2O95926 243 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms