RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SDCCAG3Q96C92 435 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CTHRC1Q96CG8 243 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 MCRS1Q96EZ8 462 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PRR25Q96S07 402 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 CCDC134Q9H6E4 229 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 RIC8AQ9NPQ8 531 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 C19orf53Q9UNZ5 99 aaPredicted RBP6.26□□□□□ -1.41
CCDC50-203ENST00000460064 LZTS1Q9Y250 596 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 PCDHB7Q9Y5E2 793 aa6.26□□□□□ -1.41
CCDC50-203ENST00000460064 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
CCDC50-203ENST00000460064 A8MVJ9 347 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 E7EVH7 732 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 CTIFO43310 598 aaKnown RBP6.25□□□□□ -1.41
CCDC50-203ENST00000460064 SPRY2O43597 315 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 LARGE1O95461 756 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 RXRAP19793 462 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 CNTFP26441 200 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 TPTEP56180 551 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 BLOC1S1P78537 153 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 E2F1Q01094 437 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 KCNJ12Q14500 433 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 FAM110CQ1W6H9 321 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 NBPF8Q3BBV2 869 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 TBC1D25Q3MII6 688 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 AASDHQ4L235 1098 aaPredicted RBP6.25□□□□□ -1.41
CCDC50-203ENST00000460064 MIIPQ5JXC2 388 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 FNDC7Q5VTL7 733 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 KIAA0895LQ68EN5 471 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 HERC6Q8IVU3 1022 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 SLC44A3Q8N4M1 653 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 NGDNQ8NEJ9 315 aaKnown RBP6.25□□□□□ -1.41
CCDC50-203ENST00000460064 SLC22A17Q8WUG5 538 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 THAP4Q8WY91 577 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 OVCA2Q8WZ82 227 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 WDYHV1Q96HA8 205 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 MAF1Q9H063 256 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 CYP4F11Q9HBI6 524 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 PGAP2Q9UHJ9 254 aa6.25□□□□□ -1.41
CCDC50-203ENST00000460064 CA12O43570 354 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 POLBP06746 335 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 HKR1P10072 659 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 CYP2C18P33260 490 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 MCM5P33992 734 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 ACTR2P61160 394 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 RALBP1Q15311 655 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 CYP1B1Q16678 543 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 ZNF551Q7Z340 670 aaPredicted RBP6.24□□□□□ -1.41
CCDC50-203ENST00000460064 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 RP9Q8TA86 221 aaKnown RBP6.24□□□□□ -1.41
CCDC50-203ENST00000460064 CAVIN3Q969G5 261 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 REXO5Q96IC2 774 aaKnown RBP6.24□□□□□ -1.41
CCDC50-203ENST00000460064 COG8Q96MW5 612 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 MECRQ9BV79 373 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 MMRN2Q9H8L6 949 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 CHODLQ9H9P2 273 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 LIN7CQ9NUP9 197 aaKnown RBP6.24□□□□□ -1.41
CCDC50-203ENST00000460064 FBXO28Q9NVF7 368 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 NDUFAF4Q9P032 175 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 GABRQQ9UN88 632 aa6.24□□□□□ -1.41
CCDC50-203ENST00000460064 ALADP13716 330 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 JUPP14923 745 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 ZNF37AP17032 561 aaPredicted RBP6.23□□□□□ -1.41
CCDC50-203ENST00000460064 NDUFB7P17568 137 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 ENGP17813 658 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 MMP8P22894 467 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 SERPINA4P29622 427 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 RBM5P52756 815 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC50-203ENST00000460064 DEUP1Q05D60 604 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 SF3A3Q12874 501 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC50-203ENST00000460064 SLC4A8Q2Y0W8 1093 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 TTC22Q5TAA0 569 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 JAKMIP3Q5VZ66 844 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 FAM90A2PQ658T7 463 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 ANKRD40Q6AI12 368 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 RINLQ6ZS11 566 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 PTCHD4Q6ZW05 846 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 Q6ZWC4 215 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 USP51Q70EK9 711 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 SYT13Q7L8C5 426 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 PRRT2Q7Z6L0 340 aaPredicted RBP6.23□□□□□ -1.41
CCDC50-203ENST00000460064 PAAF1Q9BRP4 392 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 ZNF341Q9BYN7 854 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 SERTAD4Q9NUC0 356 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 GGA3Q9NZ52 723 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 PDP2Q9P2J9 529 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 LRIT1Q9P2V4 623 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 KCND3Q9UK17 655 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 AMFRQ9UKV5 643 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 MAST3O60307 1309 aa6.23□□□□□ -1.41
CCDC50-203ENST00000460064 URI1O94763 535 aaPredicted RBP6.22□□□□□ -1.41
CCDC50-203ENST00000460064 TTLL1O95922 423 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 TK1P04183 234 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 FAM163BP0C2L3 166 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 MAKP20794 623 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 ADRA1DP25100 572 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 CTGFP29279 349 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 AVPR1BP47901 424 aa6.22□□□□□ -1.41
CCDC50-203ENST00000460064 EFR3AQ14156 821 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms