RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 CENPCQ03188 943 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 USP4Q13107 963 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 TBX2Q13207 712 aaPredicted RBP11.36□□□□□ -0.59
CCDC12-204ENST00000460035 TAF5Q15542 800 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 ACAD10Q6JQN1 1059 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 FAM183BPQ6ZVS7 135 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 BEND5Q7L4P6 421 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 VPS36Q86VN1 386 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 DDX42Q86XP3 938 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCDC12-204ENST00000460035 KIAA1958Q8N8K9 716 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 ZFYVE19Q96K21 471 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 C11orf70Q9BRQ4 267 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
CCDC12-204ENST00000460035 OLA1Q9NTK5 396 aaKnown RBP11.36□□□□□ -0.59
CCDC12-204ENST00000460035 ADAM22Q9P0K1 906 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 MARCH2Q9P0N8 246 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 NAALADL1Q9UQQ1 740 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 TRIOO75962 3097 aa11.36□□□□□ -0.59
CCDC12-204ENST00000460035 GLI1P08151 1106 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 PLEKP08567 350 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 SRFP11831 508 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 MMP8P22894 467 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 SCNN1AP37088 669 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 IFNAR2P48551 515 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 COG7P83436 770 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZXDAP98168 799 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZXDBP98169 803 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 FCHO2Q0JRZ9 810 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 MTF1Q14872 753 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZNF77Q15935 545 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 HGSNATQ68CP4 663 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 MSANTD2Q6P1R3 559 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 TOGARAM2Q6ZUX3 1019 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 XYLT1Q86Y38 959 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZDHHC17Q8IUH5 632 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 UBALD2Q8IYN6 164 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 CSGALNACT1Q8TDX6 532 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 IRF7Q92985 503 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 TRIM62Q9BVG3 475 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 POPDC2Q9HBU9 364 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ASNSD1Q9NWL6 643 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 TAS2R14Q9NYV8 317 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ADAMTS1Q9UHI8 967 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 LSM7Q9UK45 103 aaKnown RBP11.35□□□□□ -0.59
CCDC12-204ENST00000460035 DUSP12Q9UNI6 340 aa11.35□□□□□ -0.59
CCDC12-204ENST00000460035 ZNF318Q5VUA4 2279 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 VCANP13611 3396 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 DLL1O00548 723 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 DDX3XO00571 662 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC12-204ENST00000460035 CHADO15335 359 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 HSF2BPO75031 334 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 MFAP3LO75121 409 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 CALB1P05937 261 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 FYNP06241 537 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
CCDC12-204ENST00000460035 CDK17Q00537 523 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 PFKPQ01813 784 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 FAM102AQ5T9C2 384 aaPredicted RBP11.34□□□□□ -0.59
CCDC12-204ENST00000460035 SYPL2Q5VXT5 272 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 PPP1R2P3Q6NXS1 205 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 OLFML1Q6UWY5 402 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 CNGA4Q8IV77 575 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 SPC24Q8NBT2 197 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 TTC8Q8TAM2 541 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 EDAQ92838 391 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 PIWIL1Q96J94 861 aaKnown RBP11.34□□□□□ -0.59
CCDC12-204ENST00000460035 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 DEF6Q9H4E7 631 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 SLC2A4RGQ9NR83 387 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 WNT6Q9Y6F9 365 aa11.34□□□□□ -0.59
CCDC12-204ENST00000460035 SYNJ2BP-COX16A0A087WUM0 186 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 STK25O00506 426 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 SLC9A3R1O14745 358 aaPredicted RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 MSI1O43347 362 aaKnown RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 RTN2O75298 545 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 GZMAP12544 262 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 CDC25BP30305 580 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 KPNA1P52294 538 aaPredicted RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 TNK2Q07912 1038 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 PTP4A2Q12974 167 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 PDGFRLQ15198 375 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms