RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GOLGA8FQ08AF8 430 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 GOLGA8DPQ0D2H9 430 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 LRRC32Q14392 662 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 LPAL2Q16609 132 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 MEA1Q16626 185 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 GAB4Q2WGN9 574 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 ZNF394Q53GI3 561 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 TMEM196Q5HYL7 178 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 SPEM1Q8N4L4 309 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 OSCP1Q8WVF1 389 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 ATRIPQ8WXE1 791 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 SMOQ99835 787 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 MED10Q9BTT4 135 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 ECT2Q9H8V3 914 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 FAM49BQ9NUQ9 324 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 TRPM5Q9NZQ8 1165 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 ARHGAP26Q9UNA1 814 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 BZW2Q9Y6E2 419 aaKnown RBP16.41■□□□□ 0.22
SDF4-204ENST00000459994 TRDMT1O14717 391 aaKnown RBP16.4■□□□□ 0.22
SDF4-204ENST00000459994 OLFM2O95897 454 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 ABL1P00519 1130 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 SERPING1P05155 500 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 DGKKQ5KSL6 1271 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 HGSNATQ68CP4 663 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
SDF4-204ENST00000459994 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
SDF4-204ENST00000459994 WDR59Q6PJI9 974 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 GPRIN1Q7Z2K8 1008 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 WBP2Q969T9 261 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 HEXIM2Q96MH2 286 aaKnown RBP16.4■□□□□ 0.22
SDF4-204ENST00000459994 EPC1Q9H2F5 836 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 KRT82Q9NSB4 513 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 SMG5Q9UPR3 1016 aaKnown RBP16.4■□□□□ 0.22
SDF4-204ENST00000459994 CPQQ9Y646 472 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 DNAH14Q0VDD8 3507 aa16.4■□□□□ 0.22
SDF4-204ENST00000459994 HRO43593 1189 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 CYP11B1P15538 503 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 TCF3P15923 654 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 GNA15P30679 374 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 IFNAR2P48551 515 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 PXNP49023 591 aaPredicted RBP16.39■□□□□ 0.21
SDF4-204ENST00000459994 SLC5A3P53794 718 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 ARID5AQ03989 594 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 PDGFRLQ15198 375 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 STILQ15468 1287 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 ARHGAP17Q68EM7 881 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 ZNF677Q86XU0 584 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 NUP93Q8N1F7 819 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 SLC2A14Q8TDB8 520 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 EPS8L1Q8TE68 723 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 ZFRQ96KR1 1074 aaKnown RBP16.39■□□□□ 0.21
SDF4-204ENST00000459994 CEP295NLQ96MC4 621 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 HINFPQ9BQA5 517 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 IER2Q9BTL4 223 aa16.39■□□□□ 0.21
SDF4-204ENST00000459994 CHORDC1Q9UHD1 332 aaPredicted RBP16.39■□□□□ 0.21
SDF4-204ENST00000459994 NOCTQ9UK39 431 aaKnown RBP16.39■□□□□ 0.21
SDF4-204ENST00000459994 MYO18AQ92614 2054 aaKnown RBP16.38■□□□□ 0.21
SDF4-204ENST00000459994 MED7O43513 233 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 RNF40O75150 1001 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 AP1G2O75843 785 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 CD19P15391 556 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 YWHAQP27348 245 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 ADORA2BP29275 332 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 OPRD1P41143 372 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 PDE6CP51160 858 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 SLC7A9P82251 487 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 MESP2Q0VG99 397 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 CNGA2Q16280 664 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 C1orf228Q6PIY5 440 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
SDF4-204ENST00000459994 SFTPA1Q8IWL2 248 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 TFAP2BQ92481 460 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
SDF4-204ENST00000459994 RUBCNQ92622 972 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 FBXO32Q969P5 355 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 SMARCD1Q96GM5 515 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 ZSWIM1Q9BR11 485 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 SYT11Q9BT88 431 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 CCSER2Q9H7U1 834 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 IL37Q9NZH6 218 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 GMIPQ9P107 970 aa16.38■□□□□ 0.21
SDF4-204ENST00000459994 SSU72P8A0A1W2PR75 194 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 HHLA1C9JL84 531 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 O00370 1275 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 COCHO43405 550 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 THAP12O43422 761 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
SDF4-204ENST00000459994 SKILP12757 684 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 BRD2P25440 801 aaKnown RBP16.37■□□□□ 0.21
SDF4-204ENST00000459994 MAP3K7CLP57077 242 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 CDR2Q01850 454 aa16.37■□□□□ 0.21
SDF4-204ENST00000459994 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms