RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TATDN2Q93075 761 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 ELMO3Q96BJ8 720 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 RMDN1Q96DB5 314 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-228ENST00000459788 SEMA4GQ9NTN9 838 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 NAGPAQ9UK23 515 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 STRIP2Q9ULQ0 834 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 CACNA1EQ15878 2313 aa10.52□□□□□ -0.73
HDLBP-228ENST00000459788 A0A1W2PQH9 124 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 TRIM49BA6NDI0 452 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 GFRA2O00451 464 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 TULP3O75386 442 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 LATS1O95835 1130 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 ZBED1O96006 694 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 PAK1Q13153 545 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 CNGA2Q16280 664 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 PKDCCQ504Y2 493 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 ZNF394Q53GI3 561 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 ENOSF1Q7L5Y1 443 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 DGLUCYQ7Z3D6 616 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 SCD5Q86SK9 330 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 TRIM59Q8IWR1 403 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 CPXM2Q8N436 756 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 TERB1Q8NA31 727 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 IL17RCQ8NAC3 791 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 OLIG1Q8TAK6 271 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 LMO3Q8TAP4 145 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 NELFBQ8WX92 580 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 IRGQQ8WZA9 623 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 DDX1Q92499 740 aaKnown RBP10.51□□□□□ -0.73
HDLBP-228ENST00000459788 PLD4Q96BZ4 506 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 EEF2KMTQ96G04 330 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 ARID3AQ99856 593 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 NMUR1Q9HB89 426 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 CNGB3Q9NQW8 809 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 OSER1Q9NX31 292 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 FBXO10Q9UK96 956 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 TSPAN16Q9UKR8 245 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 CDV3Q9UKY7 258 aaKnown RBP10.51□□□□□ -0.73
HDLBP-228ENST00000459788 USP18Q9UMW8 372 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 CNTN6Q9UQ52 1028 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 SLC27A6Q9Y2P4 619 aa10.51□□□□□ -0.73
HDLBP-228ENST00000459788 HBS1LQ9Y450 684 aaKnown RBP10.51□□□□□ -0.73
HDLBP-228ENST00000459788 NCOR2Q9Y618 2525 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 O00370 1275 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 SLC30A4O14863 429 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 STC2O76061 302 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
HDLBP-228ENST00000459788 BMP6P22004 513 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 SLC6A11P48066 632 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PGFP49763 221 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 TKTL1P51854 596 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PDE4CQ08493 712 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 SPEM2Q0P670 501 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 RSPO4Q2I0M5 234 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PLK5Q496M5 336 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 C2orf27AQ580R0 203 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PLA2G2CQ5R387 149 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 NAIF1Q69YI7 327 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-228ENST00000459788 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PRR23CQ6ZRP0 262 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 TMEM25Q86YD3 366 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 FAM217AQ8IXS0 508 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 HHIPQ96QV1 700 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 BBS2Q9BXC9 721 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 SLC2A11Q9BYW1 496 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 DUSP15Q9H1R2 295 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-228ENST00000459788 LRRC4Q9HBW1 653 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 PARD6AQ9NPB6 346 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 VPS45Q9NRW7 570 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 ABCC13Q9NSE7 274 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 CHMP5Q9NZZ3 219 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
HDLBP-228ENST00000459788 GTPBP10A4D1E9 387 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 TBC1D3BA6NDS4 549 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 SART1O43290 800 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 FBXO21O94952 628 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 TBX18O95935 607 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 PENKP01210 267 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 AFPP02771 609 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 TYRP14679 529 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 HNRNPLP14866 589 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 NTSR1P30989 418 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 RPL34P49207 117 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 SRSF5Q13243 272 aaKnown RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 GOLGA7BQ2TAP0 167 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 ANO4Q32M45 955 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 CT47A1Q5JQC4 288 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-228ENST00000459788 SDE2Q6IQ49 451 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 BEND5Q7L4P6 421 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 KBTBD6Q86V97 674 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
HDLBP-228ENST00000459788 ZNF557Q8N988 423 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms