RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PCDH18Q9HCL0 1135 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 ABCC13Q9NSE7 274 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 COMMD8Q9NX08 183 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 RASAL2Q9UJF2 1139 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 AP4E1Q9UPM8 1137 aa25.44■■□□□ 1.66
U2AF1-204ENST00000459639 ADAM12O43184 909 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 URODP06132 367 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 OR1D2P34982 312 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 PTGIRP43119 386 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 ZC3H12AQ5D1E8 599 aaKnown RBP25.43■■□□□ 1.66
U2AF1-204ENST00000459639 SDHAF4Q5VUM1 108 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 FAM131BQ86XD5 332 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 CCDC105Q8IYK2 499 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 GPR65Q8IYL9 337 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 ATG4AQ8WYN0 398 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 CEP295NLQ96MC4 621 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 SEPT5Q99719 369 aaPredicted RBP25.43■■□□□ 1.66
U2AF1-204ENST00000459639 ZBED2Q9BTP6 218 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 CRISPLD1Q9H336 500 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 EPB41L5Q9HCM4 733 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 GPATCH2LQ9NWQ4 482 aa25.43■■□□□ 1.66
U2AF1-204ENST00000459639 RTN3O95197 1032 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 F9P00740 461 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 AIF1P55008 147 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 TMCO3Q6UWJ1 677 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 CCNI2Q6ZMN8 369 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 JAMLQ86YT9 394 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 ARHGAP18Q8N392 663 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 CCDC185Q8N715 623 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 PHOSPHO2Q8TCD6 241 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 EDEM1Q92611 657 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 CLSTN3Q9BQT9 956 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 ZNF670Q9BS34 389 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 PLEKHA4Q9H4M7 779 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 PIGVQ9NUD9 493 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 HSFX1Q9UBD0 423 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 AFF4Q9UHB7 1163 aaKnown RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 FZD10Q9ULW2 581 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 FAM92AA1XBS5 289 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 C2CD2LO14523 706 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 LINC00271P0C7V0 271 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 RPL17P18621 184 aaKnown RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 DUSP4Q13115 394 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 NME3Q13232 169 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 CA9Q16790 459 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 MAP9Q49MG5 647 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 BTBD8Q5XKL5 378 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 DRICH1Q6PGQ1 229 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 DENND5BQ6ZUT9 1274 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 RFX6Q8HWS3 928 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 TTC13Q8NBP0 860 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 SP7Q8TDD2 431 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 GRK7Q8WTQ7 553 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 CLP1Q92989 425 aaKnown RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 NTAN1Q96AB6 310 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 FRMD8P1Q9BZ68 369 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 FAM204AQ9H8W3 233 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 ARFGAP3Q9NP61 516 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 SLC27A5Q9Y2P5 690 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 UTP11Q9Y3A2 253 aaKnown RBP25.42■■□□□ 1.66
U2AF1-204ENST00000459639 SLC4A7Q9Y6M7 1214 aa25.42■■□□□ 1.66
U2AF1-204ENST00000459639 ZSCAN5CA6NGD5 496 aaPredicted RBP25.41■■□□□ 1.66
U2AF1-204ENST00000459639 CST8O60676 142 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 SYN1P17600 705 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 TFDP2Q14188 446 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 TPGS2Q68CL5 300 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 SCD5Q86SK9 330 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 MON1AQ86VX9 555 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 HERC6Q8IVU3 1022 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 VPS52Q8N1B4 723 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 SEC14L1Q92503 715 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 FAF2Q96CS3 445 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 WDR6Q9NNW5 1121 aaKnown RBP25.41■■□□□ 1.66
U2AF1-204ENST00000459639 DDIT4Q9NX09 232 aa25.41■■□□□ 1.66
U2AF1-204ENST00000459639 FEZ2Q9UHY8 353 aaPredicted RBP25.41■■□□□ 1.66
U2AF1-204ENST00000459639 MKI67P46013 3256 aaKnown RBP25.41■■□□□ 1.66
U2AF1-204ENST00000459639 ECEL1O95672 775 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 L1CAMP32004 1257 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 KRT17Q04695 432 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 MMRN1Q13201 1228 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 SNX1Q13596 522 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 EIF1ADQ8N9N8 165 aaKnown RBP25.4■■□□□ 1.66
U2AF1-204ENST00000459639 DQX1Q8TE96 717 aaKnown RBP25.4■■□□□ 1.66
U2AF1-204ENST00000459639 RNF157Q96PX1 679 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 HINFPQ9BQA5 517 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 TRIM51Q9BSJ1 452 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 MAK16Q9BXY0 300 aaKnown RBP25.4■■□□□ 1.66
U2AF1-204ENST00000459639 MTIF3Q9H2K0 278 aaKnown RBP25.4■■□□□ 1.66
U2AF1-204ENST00000459639 DHX35Q9H5Z1 703 aaKnown RBP25.4■■□□□ 1.66
U2AF1-204ENST00000459639 PLXNA4Q9HCM2 1894 aa25.4■■□□□ 1.66
U2AF1-204ENST00000459639 SYNJ2BP-COX16A0A087WUM0 186 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 LIASO43766 372 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 SOAT2O75908 522 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 ABLIM3O94929 683 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 IGLV3-25P01717 112 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 YWHAQP27348 245 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 KCNJ1P48048 391 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 TUFMP49411 452 aaKnown RBP25.39■■□□□ 1.66
U2AF1-204ENST00000459639 USP46P62068 366 aa25.39■■□□□ 1.66
U2AF1-204ENST00000459639 SCAPQ12770 1279 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms