RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SCUBE3Q8IX30 993 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 TMEM35BQ8NCS4 154 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 CD101Q93033 1021 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 GANQ9H2C0 597 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 ACP6Q9NPH0 428 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 SPATA6Q9NWH7 488 aaPredicted RBP16.91■□□□□ 0.3
CD28-203ENST00000458610 AJAP1Q9UKB5 411 aaPredicted RBP16.91■□□□□ 0.3
CD28-203ENST00000458610 SIK3Q9Y2K2 1263 aa16.91■□□□□ 0.3
CD28-203ENST00000458610 HBS1LQ9Y450 684 aaKnown RBP16.91■□□□□ 0.3
CD28-203ENST00000458610 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 LAMTOR5O43504 91 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 SERPINC1P01008 464 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 LTFP02788 710 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 CHRNB1P11230 501 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 ATP1A3P13637 1013 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 CHKAP35790 457 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 HARS2P49590 506 aaKnown RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 GALK1P51570 392 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 FZD5Q13467 585 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 TMEM196Q5HYL7 178 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 TXNDC11Q6PKC3 985 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 NUDT18Q6ZVK8 323 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 BEND5Q7L4P6 421 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 CACNA2D4Q7Z3S7 1137 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 ZNF687Q8N1G0 1237 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 MSANTD4Q8NCY6 345 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 NDRG1Q92597 394 aaKnown RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 PLD4Q96BZ4 506 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 PPP1R13BQ96KQ4 1090 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 CHRDQ9H2X0 955 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 SYNCQ9H7C4 482 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
CD28-203ENST00000458610 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
CD28-203ENST00000458610 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 PIK3R2O00459 728 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 CAPN9O14815 690 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 MDM4O15151 490 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 ATG13O75143 517 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 STC2O76061 302 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 CYP17A1P05093 508 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 GLI1P08151 1106 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 ADH5P11766 374 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 SOX5P35711 763 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 EIF2DP41214 584 aaKnown RBP16.89■□□□□ 0.29
CD28-203ENST00000458610 PDCLQ13371 301 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 ANGPT1Q15389 498 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 EFHC1Q5JVL4 640 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 RHBDF2Q6PJF5 856 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 BHLHA9Q7RTU4 235 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
CD28-203ENST00000458610 ZDHHC17Q8IUH5 632 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 BBS7Q8IWZ6 715 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 PRSS33Q8NF86 280 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 EDEM1Q92611 657 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 FAM149B1Q96BN6 582 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 SPHK2Q9NRA0 654 aa16.89■□□□□ 0.29
CD28-203ENST00000458610 E5RJQ4 531 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 GABBR2O75899 941 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 LSM8O95777 96 aaKnown RBP16.88■□□□□ 0.29
CD28-203ENST00000458610 PNMA6AP0CW24 399 aaPredicted RBP16.88■□□□□ 0.29
CD28-203ENST00000458610 KLK7P49862 253 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 CCR3P51677 355 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 YWHAZP63104 245 aaKnown RBP16.88■□□□□ 0.29
CD28-203ENST00000458610 ANO4Q32M45 955 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 LY6G5CQ5SRR4 150 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 UNC45BQ8IWX7 931 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 WDTC1Q8N5D0 677 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 ATOH1Q92858 354 aaPredicted RBP16.88■□□□□ 0.29
CD28-203ENST00000458610 XPO6Q96QU8 1125 aaKnown RBP16.88■□□□□ 0.29
CD28-203ENST00000458610 ASNSD1Q9NWL6 643 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
CD28-203ENST00000458610 F5P12259 2224 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 A0A1W2PQC6 194 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 SCAMP3O14828 347 aaKnown RBP16.87■□□□□ 0.29
CD28-203ENST00000458610 HOXC11O43248 304 aaPredicted RBP16.87■□□□□ 0.29
CD28-203ENST00000458610 GFPT2O94808 682 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 CYBBP04839 570 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 HMBSP08397 361 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 NCAM1P13591 858 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 CORO1AP31146 461 aaKnown RBP16.87■□□□□ 0.29
CD28-203ENST00000458610 JAM2P57087 298 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 ZNF445P59923 1031 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 TCF15Q12870 199 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 CCINQ13939 588 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
CD28-203ENST00000458610 TRIM72Q6ZMU5 477 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 Q6ZNB5 142 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 TOGARAM2Q6ZUX3 1019 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
CD28-203ENST00000458610 SERPINB11Q96P15 392 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 PNKPQ96T60 521 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 POPDC2Q9HBU9 364 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms