RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 MYCBPAPQ8TBZ2 947 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 MRPL39Q9NYK5 338 aaKnown RBP20.22■□□□□ 0.83
SNX27-204ENST00000458013 PIPSLA2A3N6 862 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 CORO7P57737 925 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 MRNIPQ6NTE8 343 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 GATAD2AQ86YP4 633 aa20.22■□□□□ 0.83
SNX27-204ENST00000458013 UBOX5O94941 541 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 RHOAP61586 193 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 GIT2Q14161 759 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 TRIM71Q2Q1W2 868 aaKnown RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 NUDT12Q9BQG2 462 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 RRN3P2A6NIE6 340 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 THRAP10827 490 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 PPATQ06203 517 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 ITPK1Q13572 414 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 CYP2R1Q6VVX0 501 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 DNAJC14Q6Y2X3 702 aaPredicted RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 SUGP1Q8IWZ8 645 aaKnown RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 REXO4Q9GZR2 422 aaKnown RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 TAGLN3Q9UI15 199 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 MKL2Q9ULH7 1088 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 ERVK-10P10266 1014 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 SP100P23497 879 aaPredicted RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 TBCELQ5QJ74 424 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 POU5F2Q8N7G0 328 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 TADA1Q96BN2 335 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 SH3BP4Q9P0V3 963 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 RHOCP08134 193 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 HPGDP15428 266 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 NEDD8Q15843 81 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 AADACL2Q6P093 401 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 RSPH9Q9H1X1 276 aaPredicted RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 SCAMP3O14828 347 aaKnown RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 RGS2P41220 211 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
SNX27-204ENST00000458013 MBD5Q9P267 1494 aa20.21■□□□□ 0.83
SNX27-204ENST00000458013 O00370 1275 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PHKG1Q16816 387 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 GFM2Q969S9 779 aaKnown RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 MPP4Q96JB8 637 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 MTA3Q9BTC8 594 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 CLPBQ9H078 707 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 ARMCX1Q9P291 453 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 TMCC3Q9ULS5 477 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 AAR2Q9Y312 384 aaKnown RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 CKBP12277 381 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 ABCG1P45844 678 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 ZNF34Q8IZ26 560 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 DDX18Q9NVP1 670 aaKnown RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 GLP2RO95838 553 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 CKMP06732 381 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 IRX1P78414 480 aaPredicted RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 STX5Q13190 355 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 RXFP2Q8WXD0 754 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 DCUN1D5Q9BTE7 237 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 ZFYVE1Q9HBF4 777 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PARVBQ9HBI1 364 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 MGAT1P26572 445 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 NT5C2P49902 561 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 TAF5Q15542 800 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PCNX4Q63HM2 1172 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 OSMRQ99650 979 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PABPC3Q9H361 631 aaKnown RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 KRCC1Q9NPI7 259 aaPredicted RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 ATP6V1G2O95670 118 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 TKTL1P51854 596 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 RAB14P61106 215 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PSMC6P62333 389 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 EPHX4Q8IUS5 362 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 TAS1R2Q8TE23 839 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 DTNBP1Q96EV8 351 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 EFCAB1Q9HAE3 211 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 CYP39A1Q9NYL5 469 aa20.2■□□□□ 0.82
SNX27-204ENST00000458013 PPIEQ9UNP9 301 aaKnown RBP20.2■□□□□ 0.82
SNX27-204ENST00000458013 FAM86B1E9PN63 330 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 DET1Q7L5Y6 550 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 FAM151AQ8WW52 585 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 CASP10Q92851 521 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 MIEF2Q96C03 454 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 GLI1P08151 1106 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 YWHAZP63104 245 aaKnown RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 N4BP2L1Q5TBK1 243 aaPredicted RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 RSBN1Q5VWQ0 802 aaPredicted RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 TRMT11Q7Z4G4 463 aaKnown RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 VANGL2Q9ULK5 521 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 SATB2Q9UPW6 733 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 A0A087WZ62 844 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 NTSR2O95665 410 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 CCDC130P13994 396 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 SETD3Q86TU7 594 aaPredicted RBP20.19■□□□□ 0.82
SNX27-204ENST00000458013 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
SNX27-204ENST00000458013 FDXACB1Q9BRP7 624 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms