RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 DMRT3Q9NQL9 472 aa4.54□□□□□ -1.68
UBDP1-202ENST00000457888 HDAC9Q9UKV0 1011 aa4.54□□□□□ -1.68
UBDP1-202ENST00000457888 SLC4A4Q9Y6R1 1079 aa4.54□□□□□ -1.68
UBDP1-202ENST00000457888 MYH1P12882 1939 aa4.54□□□□□ -1.68
UBDP1-202ENST00000457888 AK9Q5TCS8 1911 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 A0A1W2PRG0 241 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 HTRA2O43464 458 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 C1QL1O75973 258 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 LDHAP00338 332 aaKnown RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 NOVP48745 357 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 GSTO1P78417 241 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 SIM1P81133 766 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 MXRA7P84157 204 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 DUSP2Q05923 314 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 MALLQ13021 153 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 PICALMQ13492 652 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 IL10RAQ13651 578 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ZNF169Q14929 603 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ADRM1Q16186 407 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 SLC4A8Q2Y0W8 1093 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 KIAA1755Q5JYT7 1200 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 TMED8Q6PL24 325 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 USP45Q70EL2 814 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 CHST15Q7LFX5 561 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 MIER2Q8N344 545 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 OR2I1PQ8NGU4 316 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 PARD3BQ8TEW8 1205 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ZKSCAN4Q969J2 545 aaPredicted RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 DCPSQ96C86 337 aaKnown RBP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ARPC5LQ9BPX5 153 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 IL17RBQ9NRM6 502 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ATP8A2Q9NTI2 1148 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 SCOCQ9UIL1 159 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 ANAPC4Q9UJX5 808 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.53□□□□□ -1.68
UBDP1-202ENST00000457888 IPPQ9Y573 584 aa4.53□□□□□ -1.68
UBDP1-202ENST00000457888 PAPPA2Q9BXP8 1791 aa4.53□□□□□ -1.69
UBDP1-202ENST00000457888 DDX60LQ5H9U9 1706 aaKnown RBP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 CCDC171Q6TFL3 1326 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 SMCHD1A6NHR9 2005 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 IGKV6D-41A0A0C4DH26 115 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 CCDC154A6NI56 674 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 LRRC3CA6NJW4 275 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 NRP2O60462 931 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 CELF2O95319 508 aaKnown RBP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 LY86O95711 162 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 BAG3O95817 575 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 ALDH2P05091 517 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 CYP21A2P08686 494 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 AKR1B1P15121 316 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 FDXRP22570 491 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 MGAT1P26572 445 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 RARRES1P49788 294 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 PRKG1Q13976 671 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 ADCK5Q3MIX3 580 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 ZSCAN25Q6NSZ9 544 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 TAS1R1Q7RTX1 841 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 TBC1D10CQ8IV04 446 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 FOXP4Q8IVH2 680 aaPredicted RBP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 GLB1L2Q8IW92 636 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 FATE1Q969F0 183 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 MVB12AQ96EY5 273 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 ZNF778Q96MU6 729 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 NAA15Q9BXJ9 866 aaKnown RBP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 C1orf112Q9NSG2 853 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 MCM9Q9NXL9 1143 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 PI4KBQ9UBF8 816 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 USP25Q9UHP3 1055 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 MKI67P46013 3256 aaKnown RBP4.52□□□□□ -1.69
UBDP1-202ENST00000457888 TRPM7Q96QT4 1865 aa4.52□□□□□ -1.69
UBDP1-202ENST00000457888 PHIPQ8WWQ0 1821 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 MAST2Q6P0Q8 1798 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 TPP1O14773 563 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 MGST3O14880 152 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 PMM2O15305 246 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 NMT2O60551 498 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 PRDM1O75626 825 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 TUSC2O75896 110 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 UBXN7O94888 489 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 MYL3P08590 195 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 HSPA1AP0DMV8 641 aaKnown RBP4.51□□□□□ -1.69
UBDP1-202ENST00000457888 HSPA1BP0DMV9 641 aaKnown RBP4.51□□□□□ -1.69
UBDP1-202ENST00000457888 CPA1P15085 419 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 RHCEP18577 417 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 XPAP23025 273 aaPredicted RBP4.51□□□□□ -1.69
UBDP1-202ENST00000457888 SLC16A1P53985 500 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 NRG3P56975 720 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 HAND2P61296 217 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 RHDQ02161 417 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 DSC2Q02487 901 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
UBDP1-202ENST00000457888 PPP3CAQ08209 521 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 MGAT5Q09328 741 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 VGLL4Q14135 290 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 SAFBQ15424 915 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBDP1-202ENST00000457888 SLC35G1Q2M3R5 365 aa4.51□□□□□ -1.69
UBDP1-202ENST00000457888 FAM47AQ5JRC9 791 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms