RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 DNMT3LQ9UJW3 386 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 NUDT5Q9UKK9 219 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 COL4A2P08572 1712 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 TICRRQ7Z2Z1 1910 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 UNC80Q8N2C7 3258 aa12.31□□□□□ -0.44
TRAPPC12-212ENST00000457845 SIGLEC16A6NMB1 481 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 TMCO5BA8MYB1 307 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 ZNF263O14978 683 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 AKR1B10O60218 316 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DAB1O75553 588 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 IGLV3-25P01717 112 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 CKMP06732 381 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 MYBL1P10243 752 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 NCAM1P13591 858 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 SP100P23497 879 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 RRM1P23921 792 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 NOS2P35228 1153 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 USP4Q13107 963 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 CCDC122Q5T0U0 273 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 BNIPLQ7Z465 357 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DEFB106AQ8N104 65 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 EDEM1Q92611 657 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DEF6Q9H4E7 631 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 LIMD1Q9UGP4 676 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 CCL26Q9Y258 94 aa12.3□□□□□ -0.44
TRAPPC12-212ENST00000457845 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 FAM170AA1A519 330 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 ANKRD62A6NC57 917 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 MDM4O15151 490 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 GREM1O60565 184 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 GRAP2O75791 330 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 SLC34A2O95436 690 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 FLT3P36888 993 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 VIPR2P41587 438 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 MATKP42679 507 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 GALCP54803 685 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 COG7P83436 770 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 FCHO2Q0JRZ9 810 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 EFEMP1Q12805 493 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 NNTQ13423 1086 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 ZNF77Q15935 545 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 TRNP1Q6NT89 227 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 VITQ6UXI7 678 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 MFSD6LQ8IWD5 586 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 RNF139Q8WU17 664 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 NPY6RQ99463 290 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 RPP25Q9BUL9 199 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 PLA2G2FQ9BZM2 168 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 SMG9Q9H0W8 520 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 METTL5Q9NRN9 209 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 SPTLC3Q9NUV7 552 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 MARCH2Q9P0N8 246 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 CPQQ9Y646 472 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 EPN1Q9Y6I3 576 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 NUMBLQ9Y6R0 609 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
TRAPPC12-212ENST00000457845 SOWAHDA6NJG2 315 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 C2CD4BA6NLJ0 364 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 HEPACAM2A8MVW5 462 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 GOLGA8SH3BPF8 625 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 LEFTY2O00292 366 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 CAPN9O14815 690 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 ENDOD1O94919 500 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 IGLV3-27P01718 113 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 CYP1A2P05177 515 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 KRT3P12035 628 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 RFC1P35251 1148 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 CYLC1P35663 651 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 PTPN9P43378 593 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 RING1Q06587 406 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 TRIP4Q15650 581 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 DCAF6Q58WW2 860 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 OTUD1Q5VV17 481 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 RAD9BQ6WBX8 426 aa12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC12-212ENST00000457845 LRRC8AQ8IWT6 810 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms