RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SETD3Q86TU7 594 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRPF39Q86UA1 669 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 RASSF3Q86WH2 238 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRIM50Q86XT4 487 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARID3BQ8IVW6 561 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ULK2Q8IYT8 1036 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NDUFAF2Q8N183 169 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 AFAP1L2Q8N4X5 818 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 TAB3Q8N5C8 712 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ANKLE1Q8NAG6 615 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 STKLD1Q8NE28 680 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 CATSPER1Q8NEC5 780 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 REPS2Q8NFH8 660 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 CMASQ8NFW8 434 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 JOSD2Q8TAC2 188 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM172AQ8WUF8 416 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZFAND2BQ8WV99 257 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRPF31Q8WWY3 499 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 RXFP2Q8WXD0 754 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 TFAP2BQ92481 460 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPP2R3CQ969Q6 453 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 MCRS1Q96EZ8 462 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 SERAC1Q96JX3 654 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM84AQ96KN4 292 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 QKIQ96PU8 341 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 RNF157Q96PX1 679 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 CPXM1Q96SM3 734 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCNK16Q96T55 309 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 SERPINI1Q99574 410 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 MIPEPQ99797 713 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 EBNA1BP2Q99848 306 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NT5C1AQ9BXI3 368 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 BCO2Q9BYV7 579 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NMUR2Q9GZQ4 415 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 SMARCAD1Q9H4L7 1026 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ASB7Q9H672 318 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NRDE2Q9H7Z3 1164 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ALG13Q9NP73 1137 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NGRNQ9NPE2 291 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PAPOLBQ9NRJ5 636 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 MRGBPQ9NV56 204 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 DNAJC28Q9NX36 388 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NSMCE4AQ9NXX6 385 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 NDUFA13Q9P0J0 144 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 RCOR3Q9P2K3 495 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 THEGQ9P2T0 379 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 MORF4L1Q9UBU8 362 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 DCDC2Q9UHG0 476 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PGAP2Q9UHJ9 254 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADAM28Q9UKQ2 775 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF214Q9UL59 606 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 BARX2Q9UMQ3 279 aaPredicted RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 SOX13Q9UN79 622 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADAMTS5Q9UNA0 930 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 TNFSF13BQ9Y275 285 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 HBS1LQ9Y450 684 aaKnown RBP3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PCDHA11Q9Y5I1 949 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPP2R3BQ9Y5P8 575 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDY2AQ9Y6F7 541 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDY1Q9Y6F8 540 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 TEX264Q9Y6I9 313 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC4A7Q9Y6M7 1214 aa3.45□□□□□ -1.86
HMGN1P18-201ENST00000457642 COL11A1P12107 1806 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 PARP14Q460N5 1801 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 DOCK5Q9H7D0 1870 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 LOC285556D6RIA3 1793 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 COL1A2P08123 1366 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM237BA0A1B0GVD1 139 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 TCRBV7S3A2A0A539 114 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPPA5A6NC42 116 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SDR42E2A6NKP2 422 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM159BA6NKW6 160 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPDYE16A6NNV3 312 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ENO4A6NNW6 628 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CAPN14A8MX76 684 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM114B3SHH9 223 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 XPOTO43592 962 aaKnown RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAM189A1O60320 539 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 MSCO60682 206 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 OPHN1O60890 802 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 LGR5O75473 907 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 GCATO75600 419 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ENDOD1O94919 500 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 STAMBPO95630 424 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 HSPA4LO95757 839 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC25A27O95847 323 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CST3P01034 146 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 ITGB3P05106 788 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 MPOP05164 745 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 APOA4P06727 396 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 POLBP06746 335 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CD48P09326 243 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 LINGO3P0C6S8 592 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 STAG3L1P0CL83 205 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CXCL8P10145 99 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 KITP10721 976 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 CHRM1P11229 460 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 GM2AP17900 193 aa3.44□□□□□ -1.86
HMGN1P18-201ENST00000457642 AOC1P19801 751 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms