RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RPA3P35244 121 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 MSH2P43246 934 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 PDK4Q16654 411 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 B3GALNT2Q8NCR0 500 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 ALKBH8Q96BT7 664 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 HNRNPABQ99729 332 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 KLC2Q9H0B6 622 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 ZWINTO95229 277 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 KRT4P19013 534 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 RGS2P41220 211 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 PURAQ00577 322 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 FSCN1Q16658 493 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 FAM228AQ86W67 206 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 RASAL3Q86YV0 1011 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 GBP7Q8N8V2 638 aaPredicted RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 LRRN4Q8WUT4 740 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 PPP1R10Q96QC0 940 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 PAIP2Q9BPZ3 127 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 DHX35Q9H5Z1 703 aaKnown RBP17.32■□□□□ 0.36
CCDC43-202ENST00000457422 ETNK2Q9NVF9 386 aa17.32■□□□□ 0.36
CCDC43-202ENST00000457422 TCRBV9S1A1TA0A576 114 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 KBTBD13C9JR72 458 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 PTGESO14684 152 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 MATKP42679 507 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 FAXCQ5TGI0 409 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 TWF2Q6IBS0 349 aaKnown RBP17.31■□□□□ 0.36
CCDC43-202ENST00000457422 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
CCDC43-202ENST00000457422 MCUQ8NE86 351 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 CSPG4P5Q96PW8 444 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 KCTD15Q96SI1 283 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-202ENST00000457422 APBA2Q99767 749 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 DUSP16Q9BY84 665 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 SLC40A1Q9NP59 571 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 RCOR3Q9P2K3 495 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-202ENST00000457422 STARD13Q9Y3M8 1113 aa17.31■□□□□ 0.36
CCDC43-202ENST00000457422 DAB1O75553 588 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 GCATO75600 419 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 HNRNPH1P31943 449 aaKnown RBP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 YWHAZP63104 245 aaKnown RBP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 SLC1A5Q15758 541 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 GALNTL6Q49A17 601 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 C17orf99Q6UX52 265 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 PIGZQ86VD9 579 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 FUKQ8N0W3 1084 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 CCDC185Q8N715 623 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 SLC44A1Q8WWI5 657 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 QKIQ96PU8 341 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 GRID1Q9ULK0 1009 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 USP3Q9Y6I4 520 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 MYADML2A6NDP7 307 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 GBP2P32456 591 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 GBE1Q04446 702 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 SLC10A2Q12908 348 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 SLC25A52Q3SY17 297 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 BNIPLQ7Z465 357 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 AGGF1Q8N302 714 aaeCLIP17.3■□□□□ 0.36
CCDC43-202ENST00000457422 SOCS4Q8WXH5 440 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 KCTD13Q8WZ19 329 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 LRRC39Q96DD0 335 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 TSC2P49815 1807 aa17.3■□□□□ 0.36
CCDC43-202ENST00000457422 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 GABRDO14764 452 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 TM9SF1O15321 606 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 AVILO75366 819 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 C1QAP02745 245 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 TPSB2P20231 275 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
CCDC43-202ENST00000457422 MAGEA3P43357 314 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 SLC8A3P57103 927 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 ADIGQ0VDE8 80 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 TPSAB1Q15661 275 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 CAND1Q86VP6 1230 aaKnown RBP17.29■□□□□ 0.36
CCDC43-202ENST00000457422 BANPQ8N9N5 519 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 CCDC110Q8TBZ0 833 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 NDRG1Q92597 394 aaKnown RBP17.29■□□□□ 0.36
CCDC43-202ENST00000457422 NT5C3BQ969T7 300 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 ETNK1Q9HBU6 452 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 POPDC2Q9HBU9 364 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 KLHL14Q9P2G3 628 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 FZD10Q9ULW2 581 aa17.29■□□□□ 0.36
CCDC43-202ENST00000457422 CLDN5O00501 218 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 NPR3P17342 541 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 IGFBP6P24592 240 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 ZNF157P51786 506 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 YWHAGP61981 247 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCDC43-202ENST00000457422 KBTBD12Q3ZCT8 623 aa17.28■□□□□ 0.36
CCDC43-202ENST00000457422 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms