RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ZNF148Q9UQR1 794 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 HNRNPCL1O60812 293 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 CIB2O75838 187 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 PROSCO94903 275 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 KDSRQ06136 332 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 NR1H3Q13133 447 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 CDO1Q16878 200 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ZNF667Q5HYK9 610 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ZPBP2Q6X784 338 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 RBM44Q6ZP01 1051 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 MON1BQ7L1V2 547 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 RNF169Q8NCN4 708 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 MORC4Q8TE76 937 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 DENND1AQ8TEH3 1009 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 RBM15Q96T37 977 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■□□□ 14.2
TOP3B-213ENST00000457179 LPIN3Q9BQK8 851 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 FAM49BQ9NUQ9 324 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 PAIP2BQ9ULR5 123 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 BOLA2-SMG1P6H3BVE0 249 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 KRT4P19013 534 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ACO1P21399 889 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 AP2B1P63010 937 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 COG7P83436 770 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 BTKQ06187 659 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 SYCP2LQ5T4T6 812 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 C6orf163Q5TEZ5 329 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 LPCAT4Q643R3 524 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 C15orf39Q6ZRI6 1047 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ABRAQ8N0Z2 381 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 PARK7Q99497 189 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 TMEM120AQ9BXJ8 343 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 TMEM134Q9H6X4 195 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 SNTG2Q9NY99 539 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 IL1RAPL1Q9NZN1 696 aa14.09□□□□□ -0.15
TOP3B-213ENST00000457179 CPSF3Q9UKF6 684 aaKnown RBP14.09□□□□□ -0.15
TOP3B-213ENST00000457179 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.15
TOP3B-213ENST00000457179 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 PMM2O15305 246 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 HCRTO43612 131 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 ASS1P00966 412 aaKnown RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 KRT1P04264 644 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 HOXC6P09630 235 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 MAGEA4P43358 317 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 RGS7P49802 495 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 PLOD1Q02809 727 aaPredicted RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 C1orf127Q8N9H9 656 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 HIPK4Q8NE63 616 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 PYDC1Q8WXC3 89 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 NIF3L1Q9GZT8 377 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 ABT1Q9ULW3 272 aaKnown RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 ACTL7BQ9Y614 415 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 BANF1O75531 89 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 MAP3K6O95382 1288 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 CENPCQ03188 943 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.16
TOP3B-213ENST00000457179 MFSD7Q6UXD7 560 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 SCUBE1Q8IWY4 988 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 RHOT1Q8IXI2 618 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 ARHGAP24Q8N264 748 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 OR6Y1Q8NGX8 325 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 CATSPER2Q96P56 530 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 PANX3Q96QZ0 392 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 TWNKQ96RR1 684 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 SIKE1Q9BRV8 207 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 FLRT1Q9NZU1 646 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 DNPEPQ9ULA0 475 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
TOP3B-213ENST00000457179 IVDP26440 423 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 DGKDQ16760 1214 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 KLC3Q6P597 504 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 C2orf40Q9H1Z8 148 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 STYXL1Q9Y6J8 313 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 SBF1O95248 1867 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 PDGFRBP09619 1106 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ATP6V1B1P15313 513 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 SH3BGRP55822 239 aaPredicted RBP14.07□□□□□ -0.16
TOP3B-213ENST00000457179 DLG1Q12959 904 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 RGS9BPQ6ZS82 235 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 TRIM67Q6ZTA4 783 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ZNF554Q86TJ5 538 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 ALYREFQ86V81 257 aaKnown RBP14.07□□□□□ -0.16
TOP3B-213ENST00000457179 SHKBP1Q8TBC3 707 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 HSPBAP1Q96EW2 488 aa14.07□□□□□ -0.16
TOP3B-213ENST00000457179 MAK16Q9BXY0 300 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms