RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TRMT11Q7Z4G4 463 aaKnown RBP18.75■□□□□ 0.59
MSH6-207ENST00000456246 C11orf74Q86VG3 221 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 TMEM25Q86YD3 366 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 MIB1Q86YT6 1006 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 SIX6OS1Q8N1H7 587 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 SCML4Q8N228 414 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 MLKLQ8NB16 471 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 EHBP1Q8NDI1 1231 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 KCTD13Q8WZ19 329 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 FAM81BQ96LP2 452 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 IPO9Q96P70 1041 aaKnown RBP18.75■□□□□ 0.59
MSH6-207ENST00000456246 RASAL2Q9UJF2 1139 aa18.75■□□□□ 0.59
MSH6-207ENST00000456246 CACNG3O60359 315 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 STC2O76061 302 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 ALDH1A2O94788 518 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 PXNP49023 591 aaPredicted RBP18.74■□□□□ 0.59
MSH6-207ENST00000456246 KDSRQ06136 332 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 CNGA2Q16280 664 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 CRY1Q16526 586 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 CAMK4Q16566 473 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 ERMP1Q7Z2K6 904 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 PHTF2Q8N3S3 785 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 TERB1Q8NA31 727 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 WBP2Q969T9 261 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 BBS2Q9BXC9 721 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 ULBP1Q9BZM6 244 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 CNGB3Q9NQW8 809 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 MARCH2Q9P0N8 246 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 NUDT5Q9UKK9 219 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 USP18Q9UMW8 372 aa18.74■□□□□ 0.59
MSH6-207ENST00000456246 TBC1D3BA6NDS4 549 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 NEDD8-MDP1E9PL57 170 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 MDM4O15151 490 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 CHKAP35790 457 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 KIR2DL1P43626 348 aaPredicted RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 ADIGQ0VDE8 80 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 EFEMP1Q12805 493 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 PKDCCQ504Y2 493 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 SMYD5Q6GMV2 418 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 ENOSF1Q7L5Y1 443 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 RASSF3Q86WH2 238 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 FAM160A2Q8N612 972 aaPredicted RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 IL17RCQ8NAC3 791 aa18.73■□□□□ 0.59
MSH6-207ENST00000456246 RBBP8NLQ8NC74 664 aaPredicted RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 ZC3H10Q96K80 434 aaKnown RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 CNOT6LQ96LI5 555 aaKnown RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 INTS2Q9H0H0 1204 aaKnown RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 DNAJC17Q9NVM6 304 aaKnown RBP18.73■□□□□ 0.59
MSH6-207ENST00000456246 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.73■□□□□ 0.59
MSH6-207ENST00000456246 TYRP14679 529 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 ZNF132P52740 706 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 PUM1Q14671 1186 aaKnown RBP eCLIP18.72■□□□□ 0.59
MSH6-207ENST00000456246 ELF2Q15723 593 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 CSRP2Q16527 193 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 MEA1Q16626 185 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 USP39Q53GS9 565 aaKnown RBP18.72■□□□□ 0.59
MSH6-207ENST00000456246 ALLCQ8N6M5 410 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 NAT16Q8N8M0 369 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 TXNDC5Q8NBS9 432 aaKnown RBP18.72■□□□□ 0.59
MSH6-207ENST00000456246 UBA3Q8TBC4 463 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 RNF139Q8WU17 664 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 PLD4Q96BZ4 506 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 HSFY1Q96LI6 401 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 CLSTN2Q9H4D0 955 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 POLMQ9NP87 494 aaPredicted RBP18.72■□□□□ 0.59
MSH6-207ENST00000456246 STARD13Q9Y3M8 1113 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 PCDHGA5Q9Y5G8 931 aa18.72■□□□□ 0.59
MSH6-207ENST00000456246 DMXL1Q9Y485 3027 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 CACNA1AO00555 2505 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 M0QYV0 167 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 TULP2O00295 520 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 KLF8O95600 359 aaPredicted RBP18.71■□□□□ 0.59
MSH6-207ENST00000456246 CHRM1P11229 460 aaPredicted RBP18.71■□□□□ 0.59
MSH6-207ENST00000456246 TGM1P22735 817 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 CORO1AP31146 461 aaKnown RBP18.71■□□□□ 0.59
MSH6-207ENST00000456246 HOXC13P31276 330 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 TIE1P35590 1138 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 SPEM2Q0P670 501 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 MESP2Q0VG99 397 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 C10orf76Q5T2E6 689 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 TPGS1Q6ZTW0 290 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 RRAGAQ7L523 313 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 ARHGEF19Q8IW93 802 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 CCDC33Q8N5R6 958 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 SLC35F5Q8WV83 523 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 TFAP2BQ92481 460 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 KAT5Q92993 513 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 RMDN1Q96DB5 314 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 ABCC13Q9NSE7 274 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
MSH6-207ENST00000456246 DLL3Q9NYJ7 618 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 DACH1Q9UI36 760 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 CNTN6Q9UQ52 1028 aa18.71■□□□□ 0.59
MSH6-207ENST00000456246 HBS1LQ9Y450 684 aaKnown RBP18.71■□□□□ 0.59
MSH6-207ENST00000456246 EML5Q05BV3 1969 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 SLC12A8A0AV02 714 aa18.7■□□□□ 0.58
MSH6-207ENST00000456246 GTPBP10A4D1E9 387 aaKnown RBP18.7■□□□□ 0.58
MSH6-207ENST00000456246 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms