RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 TM4SF5O14894 197 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 TULP3O75386 442 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 BMP6P22004 513 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 GRIA2P42262 883 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 GAD2Q05329 585 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 CBWD6Q4V339 395 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 CBWD3Q5JTY5 395 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 CBWD5Q5RIA9 395 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 TPGS1Q6ZTW0 290 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 MIB1Q86YT6 1006 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 ETFBKMTQ8IXQ9 262 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 BHMTQ93088 406 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 KLF16Q9BXK1 252 aaPredicted RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 SRRTQ9BXP5 876 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 NUP62CLQ9H1M0 184 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
TREX1-203ENST00000456089 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 BCCIPQ9P287 314 aaKnown RBP eCLIP13.62□□□□□ -0.23
TREX1-203ENST00000456089 ATXN2Q99700 1313 aaKnown RBP13.62□□□□□ -0.23
TREX1-203ENST00000456089 CHD8Q9HCK8 2581 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 ACACBO00763 2458 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 TCRBV21S2A2A0A5A6 115 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 C4orf47A7E2U8 309 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 NEDD8-MDP1E9PL57 170 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 FOXD2O60548 495 aaPredicted RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 GREM1O60565 184 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 CILPO75339 1184 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 EIF2DP41214 584 aaKnown RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 FMO5P49326 533 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 TUBP50607 506 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 LIMK1P53667 647 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 SLC8A3P57103 927 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 C10orf76Q5T2E6 689 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 PPP1R26Q5T8A7 1209 aaPredicted RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 N4BP2L1Q5TBK1 243 aaPredicted RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 BTBD8Q5XKL5 378 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 DEFB119Q8N690 84 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 ZNF513Q8N8E2 541 aaPredicted RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 KIAA1958Q8N8K9 716 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 MLKLQ8NB16 471 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 CCDC26Q8TAB7 109 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 PIGKQ92643 395 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 P2RY11Q96G91 374 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 ACOX2Q99424 681 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 ARID3AQ99856 593 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 FBXO44Q9H4M3 255 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 CISHQ9NSE2 258 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 DNAJC17Q9NVM6 304 aaKnown RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 COMMD8Q9NX08 183 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 MBD1Q9UIS9 605 aaPredicted RBP13.61□□□□□ -0.23
TREX1-203ENST00000456089 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 SCML2Q9UQR0 700 aa13.61□□□□□ -0.23
TREX1-203ENST00000456089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
TREX1-203ENST00000456089 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 KMT2BQ9UMN6 2715 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 A0A0A0MRY4 1105 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 LNP1A1A4G5 178 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 GIPC1O14908 333 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 HOXC11O43248 304 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 KRT37O76014 449 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 ALDH1A2O94788 518 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 RARGP13631 454 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 TBXAS1P24557 533 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 ATP5C1P36542 298 aaKnown RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 TNFRSF4P43489 277 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 LRMPQ12912 555 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 EOGTQ5NDL2 527 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 C10orf120Q5SQS8 335 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 CLEC17AQ6ZS10 378 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 CYP2U1Q7Z449 544 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 OLIG1Q8TAK6 271 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 TATDN2Q93075 761 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 OTUB2Q96DC9 234 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 NT5C1BQ96P26 610 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 FAM124BQ9H5Z6 455 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
TREX1-203ENST00000456089 PLK2Q9NYY3 685 aa13.6□□□□□ -0.23
TREX1-203ENST00000456089 DEC1Q9P2X7 70 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms