RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SLC44A5Q8NCS7 719 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 BCAS4Q8TDM0 211 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 TSR2Q969E8 191 aaKnown RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 EDC3Q96F86 508 aaKnown RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 WDYHV1Q96HA8 205 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 MRGPRX1Q96LB2 322 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 TM2D2Q9BX73 214 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 RBM38Q9H0Z9 239 aaKnown RBP2.67□□□□□ -1.98
LINC02540-201ENST00000455554 ARMT1Q9H993 441 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 CNNM1Q9NRU3 951 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 TCEAL9Q9UHQ7 104 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 ICAM5Q9UMF0 924 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 EID1Q9Y6B2 187 aa2.67□□□□□ -1.98
LINC02540-201ENST00000455554 CCDC194A0A1B0GVG4 234 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 ALG1L2C9J202 215 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 F8W810 466 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 FYB1O15117 783 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 TPD52L2O43399 206 aaKnown RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 USP12O75317 370 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 ALDH1L1O75891 902 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 ZNF432O94892 652 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 KCNJ4P48050 445 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 TIRAPP58753 221 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 EGR4Q05215 589 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 KPNB1Q14974 876 aaKnown RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 LMBRD2Q68DH5 695 aaPredicted RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 NADSYN1Q6IA69 706 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 CCDC146Q8IYE0 955 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 NGDNQ8NEJ9 315 aaKnown RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 DNAJB14Q8TBM8 379 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 MVB12AQ96EY5 273 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 KAZALD1Q96I82 304 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 CDK5RAP3Q96JB5 506 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 PSMD1Q99460 953 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 P2RX7Q99572 595 aaKnown RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 SF3B5Q9BWJ5 86 aaKnown RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 ASPSCR1Q9BZE9 553 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 MS4A7Q9GZW8 240 aaPredicted RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 NUAK2Q9H093 628 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 TRIM36Q9NQ86 728 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 PLSCR4Q9NRQ2 329 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 CPA4Q9UI42 421 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 RIPOR2Q9Y4F9 1068 aa2.66□□□□□ -1.98
LINC02540-201ENST00000455554 SIRT4Q9Y6E7 314 aaPredicted RBP2.66□□□□□ -1.98
LINC02540-201ENST00000455554 EVPLQ92817 2033 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 LOC102724159A0A0B4J2E5 919 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 PLEKHD1A6NEE1 506 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 RRHO14718 337 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 HOXA11P31270 313 aaPredicted RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 UQCRC1P31930 480 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 MLH1P40692 756 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 SLC12A2P55011 1212 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 TBX4P57082 545 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 CTBP1Q13363 440 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 PWP2Q15269 919 aaKnown RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 TTF1Q15361 905 aaPredicted RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 TRAPPC11Q7Z392 1133 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 RBM23Q86U06 439 aaKnown RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 WDR75Q8IWA0 830 aaKnown RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 OIT3Q8WWZ8 545 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 RAPGEF4Q8WZA2 1011 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 CCDC136Q96JN2 1154 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 FCRL5Q96RD9 977 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 CGRRF1Q99675 332 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 SMAD5Q99717 465 aaKnown RBP2.65□□□□□ -1.99
LINC02540-201ENST00000455554 ARL8BQ9NVJ2 186 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 WNT16Q9UBV4 365 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 ANAPC4Q9UJX5 808 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 FZD4Q9ULV1 537 aa2.65□□□□□ -1.99
LINC02540-201ENST00000455554 TRBV5-3A0A0A0MS03 114 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 A0A1W2PPC1 479 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 TMEM233B4DJY2 109 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 PRC1O43663 620 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 SRGAP2O75044 1071 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 PAPSS2O95340 614 aaPredicted RBP2.64□□□□□ -1.99
LINC02540-201ENST00000455554 IL33O95760 270 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 CGAP01215 116 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 RHCEP18577 417 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 RPS6KB1P23443 525 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 HOXA7P31268 230 aaPredicted RBP2.64□□□□□ -1.99
LINC02540-201ENST00000455554 MCM5P33992 734 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 ARFIP2P53365 341 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 GPC5P78333 572 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 TIAL1Q01085 375 aaKnown RBP eCLIP2.64□□□□□ -1.99
LINC02540-201ENST00000455554 NFE2Q16621 373 aaPredicted RBP2.64□□□□□ -1.99
LINC02540-201ENST00000455554 KRT71Q3SY84 523 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 SLC39A5Q6ZMH5 540 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 PNPLA1Q8N8W4 532 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 ELP5Q8TE02 316 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 PIGKQ92643 395 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 HPS3Q969F9 1004 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 MSI2Q96DH6 328 aaKnown RBP2.64□□□□□ -1.99
LINC02540-201ENST00000455554 HSPBAP1Q96EW2 488 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 C8orf48Q96LL4 319 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 TRIM5Q9C035 493 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 MYH16Q9H6N6 1097 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 USP29Q9HBJ7 922 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 MLXIPLQ9NP71 852 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 FZD3Q9NPG1 666 aa2.64□□□□□ -1.99
LINC02540-201ENST00000455554 PAPOLBQ9NRJ5 636 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms