RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
VPS33A-202ENST00000451053 SLC7A9P82251 487 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 ZXDBP98169 803 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 EFEMP1Q12805 493 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 HTR4Q13639 388 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 EFHC1Q5JVL4 640 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 CCDC122Q5T0U0 273 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 SYPL2Q5VXT5 272 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
VPS33A-202ENST00000451053 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
VPS33A-202ENST00000451053 KIAA1328Q86T90 577 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 ZDHHC14Q8IZN3 488 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 ZNF276Q8N554 614 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 RSAD2Q8WXG1 361 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 GOLGA1Q92805 767 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 FGF14Q92915 247 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 NACA2Q9H009 215 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 POPDC2Q9HBU9 364 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
VPS33A-202ENST00000451053 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 ASNSD1Q9NWL6 643 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 SMPD4Q9NXE4 827 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 LIMD1Q9UGP4 676 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 STRIP2Q9ULQ0 834 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 NAALADL1Q9UQQ1 740 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 CPQQ9Y646 472 aa13.63□□□□□ -0.23
VPS33A-202ENST00000451053 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
VPS33A-202ENST00000451053 TCRBV5S1A1TA0A578 114 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ANHXE9PGG2 379 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 HSF2BPO75031 334 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 DAB1O75553 588 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 GLI1P08151 1106 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 NCAM1P13591 858 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 RRM1P23921 792 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ATP5C1P36542 298 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 MAGEA1P43355 309 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 PITX1P78337 314 aaPredicted RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 MSANTD2Q6P1R3 559 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 MIB1Q86YT6 1006 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 DEFB106AQ8N104 65 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 DQX1Q8TE96 717 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 RNF139Q8WU17 664 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ZNF653Q96CK0 615 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 VCPIP1Q96JH7 1222 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 LRRC3BQ96PB8 259 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 RPP25Q9BUL9 199 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 PLA2G2FQ9BZM2 168 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 TSGA10Q9BZW7 698 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ZFP14Q9HCL3 533 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 OLA1Q9NTK5 396 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 TDP1Q9NUW8 608 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 MARCH2Q9P0N8 246 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 WDR35Q9P2L0 1181 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 SFMBT1Q9UHJ3 866 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 RASAL2Q9UJF2 1139 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 DNMT3LQ9UJW3 386 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 INTUQ9ULD6 942 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 ARHGAP26Q9UNA1 814 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 PPP2R2CQ9Y2T4 447 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 NUMBLQ9Y6R0 609 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 HELZP42694 1942 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
VPS33A-202ENST00000451053 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
VPS33A-202ENST00000451053 HEPACAM2A8MVW5 462 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 CAPN9O14815 690 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 ZNF263O14978 683 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 MSI1O43347 362 aaKnown RBP13.61□□□□□ -0.23
VPS33A-202ENST00000451053 ASGR2P07307 311 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 H2AFZP0C0S5 128 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 ABCB4P21439 1286 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 FLT3P36888 993 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 VAV2P52735 878 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 USP4Q13107 963 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 DCAF6Q58WW2 860 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 DNAJC24Q6P3W2 148 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 VITQ6UXI7 678 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 ZNF662Q6ZS27 426 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 H2AFVQ71UI9 128 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 TADA2BQ86TJ2 420 aa13.61□□□□□ -0.23
VPS33A-202ENST00000451053 CCAR2Q8N163 923 aaKnown RBP13.61□□□□□ -0.23
VPS33A-202ENST00000451053 CELF5Q8N6W0 485 aaKnown RBP13.61□□□□□ -0.23
VPS33A-202ENST00000451053 EMC1Q8N766 993 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms