RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TTC36A6NLP5 189 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 EDIL3O43854 480 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 KDELR1P24390 212 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ADSSP30520 456 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 SFNP31947 248 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 TNFSF9P41273 254 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 GPX6P59796 221 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 CYP1B1Q16678 543 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 CNDP1Q96KN2 507 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 TBC1D23Q9NUY8 699 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF358Q9NW07 568 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 FZD1Q9UP38 647 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF536O15090 1300 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 LAMA4Q16363 1823 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 TPP1O14773 563 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 KDM1AO60341 852 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 UQCRBP14927 111 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 MGAT1P26572 445 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 NAGLUP54802 743 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 FUT11Q495W5 492 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ZC3H12AQ5D1E8 599 aaKnown RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 RNASEH2BQ5TBB1 312 aaKnown RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 KLC3Q6P597 504 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 DDIASQ8IXT1 998 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 S100A14Q9HCY8 104 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 COMMD3-BMI1R4GMX3 469 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 LMTK3Q96Q04 1460 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 IRF6O14896 467 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 PHGDHO43175 533 aaKnown RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 TSPAN8P19075 237 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 GNAZP19086 355 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 PSMD7P51665 324 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 DCTN2Q13561 401 aaKnown RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 PTK2BQ14289 1009 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 STRA8Q7Z7C7 330 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 C10orf107Q8IVU9 208 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 MYO1HQ8N1T3 1032 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 OR6P1Q8NGX9 317 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 BSNDQ8WZ55 320 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 ILKAPQ9H0C8 392 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-204ENST00000449510 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 LTN1O94822 1766 aa12.79□□□□□ -0.36
UBE3B-204ENST00000449510 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 ABHD2P08910 425 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 RARBP10826 455 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 MOGSQ13724 837 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 OTUD3Q5T2D3 398 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 KYQ8NBH2 561 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 OMDQ99983 421 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CAB39LQ9H9S4 337 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 PPCSQ9HAB8 311 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 DMAC2Q9NW81 257 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 NR4A1P22736 598 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 RGS2P41220 211 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 RPL5P46777 297 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 PCYT1AP49585 367 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 HMGCS2P54868 508 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 TMEM62Q0P6H9 643 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 GLRA4Q5JXX5 417 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CDHR3Q6ZTQ4 885 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 APLFQ8IW19 511 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 PRKCBP05771 671 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 HSPA8P11142 646 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 GPD1P21695 349 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 SNX16P57768 344 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 DGKDQ16760 1214 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms