RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 DIP2AQ14689 1571 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 KATNA1O75449 491 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 JCHAINP01591 159 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 FGBP02675 491 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 NRSN1Q8IZ57 195 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 ACOX2Q99424 681 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 USP17L7P0C7H9 530 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 GLRBP48167 497 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 BBS4Q96RK4 519 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 HIC1Q14526 733 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 GLT6D1Q7Z4J2 308 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 TRDMT1O14717 391 aaKnown RBP13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 ZNF185O15231 689 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 MED24O75448 989 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 SKP1P63208 163 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 BOLA3Q53S33 107 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 DSELQ8IZU8 1212 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 CASP10Q92851 521 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 TUBGCP3Q96CW5 907 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 RBBP8Q99708 897 aa13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 PSMC3IPQ9P2W1 217 aaPredicted RBP13.12□□□□□ -0.31
AC006001.3-201ENST00000449307 CCL16O15467 120 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 HS6ST1O60243 411 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 UMPSP11172 480 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 MAPK1P28482 360 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SCNN1GP51170 649 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RAET1GQ6H3X3 334 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RBM22Q9NW64 420 aaKnown RBP eCLIP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SH3BP4Q9P0V3 963 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 KANSL1LA0AUZ9 987 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 C1QTNF3-AMACRE9PGA6 284 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 HDCP19113 662 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RRM2P31350 389 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 CYTH1Q15438 398 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RARS2Q5T160 578 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ADI1Q9BV57 179 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 BBS2Q9BXC9 721 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 FANCEQ9HB96 536 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 KIAA1257Q9ULG3 409 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 NT5C1B-RDH14C9J2C7 533 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 TGFB3P10600 412 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 GGCXP38435 758 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 PPP4CP60510 307 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 POLR2LP62875 67 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 CYP24A1Q07973 514 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 STK4Q13043 487 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 PRUNE1Q86TP1 453 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 IL1RAPL1Q9NZN1 696 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 IRF6O14896 467 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 AXLP30530 894 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 MARC1Q5VT66 337 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ANO5Q75V66 913 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 LPPQ93052 612 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 APBA2Q99767 749 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 UNKQ9C0B0 810 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 TRIT1Q9H3H1 467 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 NCAM2O15394 837 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ATP5HO75947 161 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 CTCFP49711 727 aaPredicted RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 MRPL28Q13084 256 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 ALKBH4Q9NXW9 302 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 GOLGA8TH3BQL2 631 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 NOS3P29474 1203 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 FLT3LGP49771 235 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 NDST1P52848 882 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
AC006001.3-201ENST00000449307 USP45Q70EL2 814 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms