RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ARHGAP26Q9UNA1 814 aa11.14□□□□□ -0.63
SMPD4-211ENST00000449159 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
SMPD4-211ENST00000449159 F5P12259 2224 aa11.14□□□□□ -0.63
SMPD4-211ENST00000449159 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 MIA3Q5JRA6 1907 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 TMCO5BA8MYB1 307 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 LEFTY2O00292 366 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 DDX3XO00571 662 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 DPYSL4O14531 572 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 GRAP2O75791 330 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ADCY5O95622 1261 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 SERPING1P05155 500 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 IRF1P10914 325 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 RALAP11233 206 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 PFKLP17858 780 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 TNFAIP3P21580 790 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 MMP8P22894 467 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 GABRB2P47870 512 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 PTP4A2Q12974 167 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 TDGQ13569 410 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 SYPL2Q5VXT5 272 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 BTBD8Q5XKL5 378 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 OR6B2Q6IFH4 312 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 RSRC2Q7L4I2 434 aaKnown RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 XYLT1Q86Y38 959 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 MFSD6LQ8IWD5 586 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ARHGAP18Q8N392 663 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
SMPD4-211ENST00000449159 SH3RF2Q8TEC5 729 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 C18orf8Q96DM3 657 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 NACA2Q9H009 215 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 CFAP97Q9P2B7 532 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 ARHGAP20Q9P2F6 1191 aa11.13□□□□□ -0.63
SMPD4-211ENST00000449159 FRYLO94915 3013 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 GOLGA8SH3BPF8 625 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 SART1O43290 800 aaKnown RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 MSI1O43347 362 aaKnown RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 GJB6O95452 261 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 TPM1P09493 284 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 NCAM1P13591 858 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 PSMC3P17980 439 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 GDI1P31150 447 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 NSFP46459 744 aaKnown RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 NUBP1P53384 320 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 YWHAZP63104 245 aaKnown RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 GPC5P78333 572 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 PITX1P78337 314 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 MTF1Q14872 753 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 KLHDC10Q6PID8 442 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 MON1BQ7L1V2 547 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 PHF13Q86YI8 300 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 OR8K1Q8NGG5 319 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 BPIFB1Q8TDL5 484 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 RNF139Q8WU17 664 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 ATOH1Q92858 354 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 NXPE3Q969Y0 559 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 KLF16Q9BXK1 252 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-211ENST00000449159 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 ADAM22Q9P0K1 906 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 SFMBT1Q9UHJ3 866 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 NAALADL1Q9UQQ1 740 aa11.12□□□□□ -0.63
SMPD4-211ENST00000449159 A0A087X0T9 212 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-211ENST00000449159 ARNTLO00327 626 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 ATMINO43313 823 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-211ENST00000449159 GREM1O60565 184 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 HSF2BPO75031 334 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 HMBSP08397 361 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 FAM228BP0C875 321 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 CDC25BP30305 580 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 AVPR2P30518 371 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 EIF4A3P38919 411 aaKnown RBP11.11□□□□□ -0.63
SMPD4-211ENST00000449159 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
SMPD4-211ENST00000449159 TNK2Q07912 1038 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 TRIM68Q6AZZ1 485 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 TRNP1Q6NT89 227 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 MSANTD2Q6P1R3 559 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 SLC26A9Q7LBE3 791 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
SMPD4-211ENST00000449159 DEFB106AQ8N104 65 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms