RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 RAB6CQ53S08 254 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 DCAF6Q58WW2 860 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 FAM78AQ5JUQ0 283 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 SH3PXD2AQ5TCZ1 1133 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 OTUD1Q5VV17 481 aaPredicted RBP12.4□□□□□ -0.43
RCL1-208ENST00000448872 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 RSRC2Q7L4I2 434 aaKnown RBP12.4□□□□□ -0.43
RCL1-208ENST00000448872 TAC4Q86UU9 113 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 MIB1Q86YT6 1006 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 RIN3Q8TB24 985 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.43
RCL1-208ENST00000448872 DQX1Q8TE96 717 aaKnown RBP12.4□□□□□ -0.43
RCL1-208ENST00000448872 GOLGA1Q92805 767 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 BTBD6Q96KE9 485 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 NACA2Q9H009 215 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 RAB6CQ9H0N0 254 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 PARVAQ9NVD7 372 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 ASNSD1Q9NWL6 643 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 CLIC5Q9NZA1 410 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 THEGQ9P2T0 379 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.43
RCL1-208ENST00000448872 TRAV19A0A0A6YYK7 116 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 CAPN9O14815 690 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 SCAMP3O14828 347 aaKnown RBP12.39□□□□□ -0.43
RCL1-208ENST00000448872 OLFM2O95897 454 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 CKMP06732 381 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 GLI1P08151 1106 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 SCNN1AP37088 669 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 PSEN1P49768 467 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 TUBP50607 506 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
RCL1-208ENST00000448872 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 ARID3BQ8IVW6 561 aaPredicted RBP12.39□□□□□ -0.43
RCL1-208ENST00000448872 CMTM8Q8IZV2 173 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 TTC16Q8NEE8 873 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 RXFP2Q8WXD0 754 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 CTNNBL1Q8WYA6 563 aaPredicted RBP12.39□□□□□ -0.43
RCL1-208ENST00000448872 WBP2Q969T9 261 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 RSPRY1Q96DX4 576 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 RPGRIP1Q96KN7 1286 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
RCL1-208ENST00000448872 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 OSGEPQ9NPF4 335 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 GKN1Q9NS71 199 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
RCL1-208ENST00000448872 TRIM10Q9UDY6 481 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 CPQQ9Y646 472 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 DUSP10Q9Y6W6 482 aa12.39□□□□□ -0.43
RCL1-208ENST00000448872 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 C2CD4BA6NLJ0 364 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 HMBSP08397 361 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 MBL2P11226 248 aaPredicted RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 PDGFRAP16234 1089 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 ATP5C1P36542 298 aaKnown RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 VIPR2P41587 438 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 MATKP42679 507 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 ATXN1P54253 815 aaKnown RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 ATP11AP98196 1134 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 C15orf59Q2T9L4 293 aaPredicted RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 ASB16Q96NS5 453 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 TBCBQ99426 244 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 DDX23Q9BUQ8 820 aaKnown RBP12.38□□□□□ -0.43
RCL1-208ENST00000448872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.43
RCL1-208ENST00000448872 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 CTTNBP2NLQ9P2B4 639 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 SALL4Q9UJQ4 1053 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
RCL1-208ENST00000448872 PTPRDP23468 1912 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 SLC12A8A0AV02 714 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
RCL1-208ENST00000448872 IRF1P10914 325 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 LAMP2P13473 410 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 FCARP24071 287 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 DDX6P26196 483 aaKnown RBP eCLIP12.37□□□□□ -0.43
RCL1-208ENST00000448872 NOS2P35228 1153 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 AVPR1AP37288 418 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 SULT1E1P49888 294 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 SLC7A9P82251 487 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 NME3Q13232 169 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 CDO1Q16878 200 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 DAB2IPQ5VWQ8 1189 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 MSANTD2Q6P1R3 559 aa12.37□□□□□ -0.43
RCL1-208ENST00000448872 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms