RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 E7ENQ6 273 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 TTC4O95801 387 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 RPL22P35268 128 aaKnown RBP18.43■□□□□ 0.54
LMNA-208ENST00000448611 DMTNQ08495 405 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 C1orf228Q6PIY5 440 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 KDM7AQ6ZMT4 941 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 HOOK3Q86VS8 718 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 URGCPQ8TCY9 931 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 KCTD15Q96SI1 283 aaPredicted RBP18.43■□□□□ 0.54
LMNA-208ENST00000448611 MCOLN1Q9GZU1 580 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 TBC1D13Q9NVG8 400 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 TMEM161AQ9NX61 479 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 FZD10Q9ULW2 581 aa18.43■□□□□ 0.54
LMNA-208ENST00000448611 FARP1Q9Y4F1 1045 aaPredicted RBP18.43■□□□□ 0.54
LMNA-208ENST00000448611 TMEM189-UBE2V1I3L0A0 370 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 COL6A1P12109 1028 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 CYP2F1P24903 491 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 BCAR1P56945 870 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 SKOR1P84550 965 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 ROR1Q01973 937 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 GLIPR1L2Q4G1C9 344 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 BHLHA9Q7RTU4 235 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 ZC3H18Q86VM9 953 aaKnown RBP18.42■□□□□ 0.54
LMNA-208ENST00000448611 FAM131BQ86XD5 332 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 PSTKQ8IV42 348 aaKnown RBP18.42■□□□□ 0.54
LMNA-208ENST00000448611 THEM5Q8N1Q8 247 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 FAM71DQ8N9W8 422 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 UHMK1Q8TAS1 419 aaKnown RBP18.42■□□□□ 0.54
LMNA-208ENST00000448611 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 NRDE2Q9H7Z3 1164 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 NINJ2Q9NZG7 142 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 KANSL3Q9P2N6 904 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 SHOC2Q9UQ13 582 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 NAALADL1Q9UQQ1 740 aa18.42■□□□□ 0.54
LMNA-208ENST00000448611 NDC80O14777 642 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 SHOX2O60902 331 aaPredicted RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 ZBED1O96006 694 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 NR1D1P20393 614 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 BDNFP23560 247 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 STIP1P31948 543 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 RDXP35241 583 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 PLEKHG4Q58EX7 1191 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 DNAJC21Q5F1R6 531 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 PRCCQ92733 491 aaPredicted RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 USP3Q9Y6I4 520 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 M0QYT0 321 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 ENPP3O14638 875 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 ACSL3O95573 720 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 USP17L7P0C7H9 530 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 MAPRE1Q15691 268 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 KYNUQ16719 465 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 DARS2Q6PI48 645 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 CEP128Q6ZU80 1094 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 PCGF5Q86SE9 256 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 DBF4BQ8NFT6 615 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 PGM2Q96G03 612 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 CSPG4P5Q96PW8 444 aa18.41■□□□□ 0.54
LMNA-208ENST00000448611 RBM15Q96T37 977 aaKnown RBP eCLIP18.41■□□□□ 0.543e-6■■■■□ 20.8
LMNA-208ENST00000448611 ELAC1Q9H777 363 aaKnown RBP18.41■□□□□ 0.54
LMNA-208ENST00000448611 LTFP02788 710 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 CAPN2P17655 700 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 TSPY1Q01534 308 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 YWHAHQ04917 246 aaPredicted RBP18.4■□□□□ 0.54
LMNA-208ENST00000448611 B4GALNT4Q76KP1 1039 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 ZNF771Q7L3S4 317 aaPredicted RBP18.4■□□□□ 0.54
LMNA-208ENST00000448611 PYROXD2Q8N2H3 581 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 CPT1BQ92523 772 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 TLCD1Q96CP7 247 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 USP29Q9HBJ7 922 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 DMAP1Q9NPF5 467 aaPredicted RBP18.4■□□□□ 0.54
LMNA-208ENST00000448611 PIGVQ9NUD9 493 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
LMNA-208ENST00000448611 BCCIPQ9P287 314 aaKnown RBP eCLIP18.4■□□□□ 0.54
LMNA-208ENST00000448611 DNAJB4Q9UDY4 337 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 NOVA2Q9UNW9 492 aaKnown RBP18.4■□□□□ 0.54
LMNA-208ENST00000448611 HEY1Q9Y5J3 304 aa18.4■□□□□ 0.54
LMNA-208ENST00000448611 H7C0C1 242 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 PITPNM1O00562 1244 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 ZFXP17010 805 aaPredicted RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 ATP5OP48047 213 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 NRLP54845 237 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 DEUP1Q05D60 604 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 PM20D1Q6GTS8 502 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 SCML4Q8N228 414 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 NAT8LQ8N9F0 302 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 IRGQQ8WZA9 623 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 RTP4Q96DX8 246 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 PNPLA8Q9NP80 782 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 RCOR3Q9P2K3 495 aaPredicted RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 COL4A4P53420 1690 aaPredicted RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 CAPN9O14815 690 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 MAGEA4P43358 317 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 OR1G1P47890 313 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 ATP1A2P50993 1020 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 RNASELQ05823 741 aaKnown RBP18.39■□□□□ 0.53
LMNA-208ENST00000448611 PPIL6Q8IXY8 311 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 SLC7A14Q8TBB6 771 aa18.39■□□□□ 0.53
LMNA-208ENST00000448611 EPS8L3Q8TE67 593 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms