RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 BSPRYQ5W0U4 402 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 NUDT18Q6ZVK8 323 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 ADGRG2Q8IZP9 1017 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 CD101Q93033 1021 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 FAM149B1Q96BN6 582 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 ZFRQ96KR1 1074 aaKnown RBP17.15■□□□□ 0.34
SF3A1-204ENST00000447376 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 MIS12Q9H081 205 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 DLGAP2Q9P1A6 1054 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 SLC12A8A0AV02 714 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 H0Y858 1186 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 TRDMT1O14717 391 aaKnown RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 CAPN9O14815 690 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 LTFP02788 710 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 CYP17A1P05093 508 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 ADH5P11766 374 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 PGFP49763 221 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 POLR2FP61218 127 aaKnown RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 NR1I3Q14994 352 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 DHCR24Q15392 516 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 FBXO43Q4G163 708 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 DENND1BQ6P3S1 775 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 HTR3DQ70Z44 454 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 FAM71AQ8IYT1 594 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 MSANTD4Q8NCY6 345 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 IPO4Q8TEX9 1081 aaKnown RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
SF3A1-204ENST00000447376 GANQ9H2C0 597 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 CHRDQ9H2X0 955 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 PCDHGC3Q9UN70 934 aa17.14■□□□□ 0.33
SF3A1-204ENST00000447376 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 E7ENQ6 273 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 PIK3R2O00459 728 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
SF3A1-204ENST00000447376 MDM4O15151 490 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 TEX33O43247 280 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 ATG13O75143 517 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 HMBSP08397 361 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 CHRNB1P11230 501 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 CHKAP35790 457 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
SF3A1-204ENST00000447376 KLK7P49862 253 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 CCR3P51677 355 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 ANO4Q32M45 955 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 TMEM196Q5HYL7 178 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
SF3A1-204ENST00000447376 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 BBS7Q8IWZ6 715 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 EDEM1Q92611 657 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 LHX5Q9H2C1 402 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 ACP6Q9NPH0 428 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
SF3A1-204ENST00000447376 OTOL1A6NHN0 477 aaPredicted RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 F8VZ95 297 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 NCAM1P13591 858 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 CLCN1P35523 988 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 GALK1P51570 392 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 TCF15Q12870 199 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 PDCLQ13371 301 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 LY6G5CQ5SRR4 150 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 SLC47A2Q86VL8 602 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 PASD1Q8IV76 773 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 TMEM35BQ8NCS4 154 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 IFNKQ9P0W0 207 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 WDR35Q9P2L0 1181 aa17.12■□□□□ 0.33
SF3A1-204ENST00000447376 AJAP1Q9UKB5 411 aaPredicted RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 HBS1LQ9Y450 684 aaKnown RBP17.12■□□□□ 0.33
SF3A1-204ENST00000447376 SHISA7A6NL88 538 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 E5RJQ4 531 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 STC2O76061 302 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 CYBBP04839 570 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 PNMA6AP0CW24 399 aaPredicted RBP17.11■□□□□ 0.33
SF3A1-204ENST00000447376 CYP11B1P15538 503 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 CORO1AP31146 461 aaKnown RBP17.11■□□□□ 0.33
SF3A1-204ENST00000447376 PLA2G5P39877 138 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 STAT1P42224 750 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 NRLP54845 237 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 NHLH1Q02575 133 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 MTAPQ13126 283 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 CCINQ13939 588 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SF3A1-204ENST00000447376 TMEM110Q86TL2 294 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms